Oncorhynchus tshawytscha (Chinook salmon): 112227903
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Entry
112227903 CDS
T05605
Symbol
cdk13
Name
(RefSeq) cyclin-dependent kinase 13
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112227903 (cdk13)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
112227903 (cdk13)
2.7.11.23 [RNA-polymerase]-subunit kinase
112227903 (cdk13)
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: CMGC group
CDK family
112227903 (cdk13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
112227903
NCBI-ProteinID:
XP_024248663
LinkDB
All DBs
Position
LG29:13356335..13365904
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AA seq
1394 aa
AA seq
DB search
MPNPEVFREGRGRSPSTQRSARQERRSNVKPGSGATPHREKHREKRRSSSIRKKHSHARG
KTQWHTPDDPDSERRGTLERGELRTLVEYDDVSSQSERFSGSPSPKPEPHATILVDRLSE
VEFTGMNGPTSPERRSRRDRAVLHLRKDEQISGSSERNRQEKEPKRKERQSRERDTSKSR
GSSLSATKNNRDGARNIDSNGKRTSTTLAPMSLDKKESKRHKSKTRSEKEPPSAYRDAPQ
SYRDDREELGAYRRSPGFKADSPHGKSYSYGYQSPSGSYNNQFISRRSPSYGNKRLSPTS
TYYSRDSEVYGAYNISKSPSSYSSNKRKRSPTSPFNWRRSPSYGRHSPFEQGELASSPYG
TRRRSRSPYRKSMSPSPDVRRSGKSRSRSPYSPSRHSRSRSRHRHSRSRSRPSSLSPSTL
TFKSSLAAELSKQKKAKAAEAAARAKSSSSTSTPTKVPSAGSHQPSPKTNHATKKGPRTP
VSSQPQSPTDRTSKRSTEPPKASKDRDVKGKDVPSVQRDKRKVPASGQGKEKERVTAPTA
STLTSLHLPPNIFEHLAGADSLKDILPSLSGKNPAERQKARHLLSDLPLPPELPTGASSP
HSPYDEKKTTLRRRPKICGPRFGEIKETEIDWGKRCVDKFEIIGITGEGTYGQVYKAKDK
DTAEMVALKKVRLDNEKEGFPITAIREIKILRQLNHKSIINMKEIVTDKEDALDFKNDKG
AFYLVFEYMDHDLMGLLESGLVHFNESHIKSFMRQLLEGLDYCHKKNFLHRDIKCSNILL
NNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILG
ELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFA
FIPPSALDLFDHMLALDPSKRCAAEAALSSEFLKDVDPTKMPPPDLPLWQDCHELWSKKR
RRQKQMPEELSASKAPRKELGLGDDSRSNTPQGFPPPGGLKGQPVAASALLDSKAPNSQL
TQEQLAVLLNLLGQSKSAVNPAQIAKVNPETLQQLSKVLPPEHSDSDRPPEPHPPLKPHK
LPQSGGAPRTPPMPKPPSPHPSSASQGKSDGEASAATQTAVTMLLAQLLQAQQRQEAGDT
DGTNAPAGGPPLPPSEPKQPPEPIPVSPVSEGSGVSSRPILPPDQRPPEPPEPPPRCEDL
DYRQKMARKTGHLLPMPTSGGAGEGGRLPEPDYPPHPGTEGPSYGGDYSRPPPPPFPPVG
FGDCYMGHMLGGGLPPHNLREVFSSSTQQSSATGSLATSLQEPFPSGRGGGVSSMVFSGD
KDHRFEYNHSPSLPVEGKPNPTSIHLYNHATPPPPIPLPGQSWSSPSQAVAPPMPLGFNP
HVNSAAMRGRHLPF
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacccggaggtgtttcgcgagggtcggggaagaagcccatcgacacagagaagt
gccagacaggagcggcgcagtaacgttaaacctggaagcggtgctactccgcaccgagag
aaacaccgggagaagaggcggtcgtcatctatccgaaagaaacacagtcacgctaggggg
aaaacacaatggcatacgccagatgacccagacagtgaacggagaggcactcttgaaaga
ggtgaacttcggactttagtggaatatgacgatgtgagttcccaatcagaacgcttttct
gggagcccttcgccgaaaccagaaccgcatgctactattttggtcgaccgacttagtgaa
gttgagttcacaggcatgaacggaccgacatccccagagagaaggtctcgaagagacagg
gctgtattgcatctcaggaaggatgaacaaatcagtggttcgtccgagaggaatagacaa
gagaaggaaccgaaaagaaaggaacgccagagccgtgagagggatacttcaaaatctcgt
ggtagtagcctgagcgccaccaaaaacaaccgagacggtgcgagaaacattgacagtaac
ggcaagaggacgtctacaaccttggcccccatgtctttggacaaaaaggaatctaaacgg
cacaaaagtaagacacgttcggaaaaggagcccccgtctgcatacagggatgcaccacaa
tcataccgagatgaccgtgaagaactcggggcctacagaagaagtcctggtttcaaggca
gacagcccacatgggaaatcgtattcctatggatatcagtctcccagtggtagttataat
aaccagtttatatctagaagaagtcccagttatgggaacaaaaggctgtcccctacttca
acatactacagccgagattctgaggtctatggtgcctacaacatttcaaagtcgcccagt
tcatactcgagtaacaaaagaaagcggtctccaacgagcccattcaattggcgcaggtct
ccaagttatggccgacatagtccattcgaacagggagaacttgcttcaagtccctacggt
acccgtcggcgatcacgaagtccataccgaaagtcaatgagcccaagtccagacgtaagg
cgatctggcaagtctcgaagcaggagtccgtattccccctcgaggcactcccgctcacgc
agccgtcaccgccactctcgctcccgcagccgaccctccagcctctcccccagcacattg
accttcaagagcagcctggcggccgagctcagcaagcagaagaaggccaaagctgccgag
gcagctgcccgggccaagagctccagtagcacctcaactcccaccaaggttccctctgca
ggctcccaccaacccagccccaaaaccaaccacgccactaagaagggccccaggacccct
gtgtcgagccagccccagtcccccacagacaggacctccaagagaagcacagagcccccc
aaggccagcaaggatagagatgtgaaggggaaggatgtcccctcggtgcaacgagacaag
aggaaagtaccagcatctggacagggcaaagagaaggaacgagtcactgccccaactgcc
tctacactgacatctctacacctgcccccgaacatcttcgagcacttagctggagcagac
agcttgaaggacatcttaccatcgctatcagggaagaatccagcagagcgtcagaaggcc
cgccacctcctgagcgacctgccccttcctcccgagctacccacaggcgcctcctcccct
cacagcccatatgacgagaagaagaccacgcttcgccgcaggcccaagatctgcggccca
cgctttggggagatcaaggagactgagatcgattgggggaaacggtgcgtggacaagttt
gagatcatcggcatcacaggagaaggcacctacggccaggtgtacaaggcaaaagacaaa
gatacagctgagatggtggccttgaagaaggtgcgcctcgacaatgagaaggagggcttc
cctatcaccgccatcagggagatcaaaatcctccgccaactcaaccacaagagcatcatc
aacatgaaggagatagtcactgacaaggaggacgccctggacttcaagaacgacaaaggt
gcgttctacctggtgtttgaatacatggaccacgacctgatggggctgctggagtctggc
ctggtccacttcaacgagagccacatcaagtccttcatgaggcagctgctggagggcctc
gactactgccacaagaagaatttcctgcacagggacatcaagtgctccaacatcttgctt
aacaacaagggtcaaataaagctggcagattttggactggctcgactttataactctgag
gagagccgaccgtacaccaacaaggtgatcaccctgtggtacagacccccagagctttta
ctgggggaggagaggtacacacctgccattgatgtgtggagctgcgggtgcattctgggg
gagcttttcacaaagaagcccattttccaagccaatcaggagcttgcccagttagagctg
atcagtcgaatctgtggcagcccctgccccgctgtgtggccagatgtcatcaagctgccc
tacttcaacaccatgaaaccaaagaaacagtaccggcggcggttgcgagaagagtttgct
tttataccaccctctgccctggacctgtttgaccacatgctggcactggaccccagtaag
cgctgcgctgccgaggcggcgctaagcagtgagttcctcaaagacgtggacccaaccaag
atgcccccaccagatctccccctgtggcaggactgccatgagttgtggagtaagaagcgg
cggaggcagaagcagatgccagaggagctgtcagcctccaaggctccccgtaaggagctg
gggctgggagacgacagtcgtagcaacaccccccagggcttccctccgcctgggggactc
aaaggccaacctgtggctgcctcagccctactggactcaaaagcccccaactcccagctg
acccaggaacagctggcggttctcctcaacctgctcggccagtccaagagcgctgtcaac
ccggcccagattgccaaggtcaaccccgagactctacagcagctctccaaggtcctgcca
ccagaacactctgactccgaccggcctccagagccacaccctccactcaagccccacaag
ctccctcagtcaggtggagcaccccgcacgccccccatgcccaagcccccatcgccacat
ccctcgtcggcatcgcagggtaagtctgatggggaggcgtcggcagccacccagacggca
gtcaccatgctactggcccagctcctccaggcccagcagaggcaggaagctggcgataca
gacggcacaaacgcaccagcaggaggacctcctctgccaccctctgagccaaagcagccc
ccagagcctatccctgtctcgccagtgtccgaggggagcggagtttcctccagacccatc
ctcccccccgaccagagaccccctgaaccacccgagccccctccccgctgcgaggacttg
gactaccggcagaagatggcgcgtaagacgggccacctgctgcctatgccaacctcaggt
ggagctggtgagggaggaaggctcccggagccagactacccaccccaccccggcacagaa
ggacccagctatggcggtgactacagccgcccaccccctccacccttccctcctgtaggt
tttggcgactgctacatgggccacatgttggggggtggcctacccccccacaacctgagg
gaagtgttcagcagcagtactcagcagtcctcggctaccgggtccctggccacctcactc
caggagcccttcccttcaggcaggggtggaggtgttagcagcatggtgttcagcggtgac
aaagaccatcgttttgagtacaatcacagcccctccttgcctgtggaagggaagcccaac
cccaccagcatccacctctacaaccatgctacccctcccccgcccatccctcttccgggc
cagtcctggagctccccttcccaggctgtggccccacctatgccccttggcttcaaccca
catgtgaactcagcagccatgcgaggacgacacctccccttctga
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integrated database retrieval system
