Oncorhynchus tshawytscha (Chinook salmon): 112227911
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Entry
112227911 CDS
T05605
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112227911
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Major cadherins
112227911
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
PH_3
Motif
Other DBs
NCBI-GeneID:
112227911
NCBI-ProteinID:
XP_024248676
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Position
LG29:complement(12939339..13057326)
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AA seq
803 aa
AA seq
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MRWCGSGSVWRAGALLALLLPLWELGCWGLISASGASGTQNQVQHTAGGPWELLRRHKRS
WVWNQFFVLEEYTGEEPLYVGKLHSDVDKGDGKVKYVLSGEGSTSIFTIDENTGDIHATK
RLDREEQAYYTLQAQAVDRLTNIPVEPRSEFVVKVQDINDNEPKFLDGPYMAGVPEMSAL
GTTVVQVAATDADDPTYGNSARVVYSIISGQPYFSVDPKTGVVRTALPNMDREVKDQYVL
VIQAKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFSRKNYQYMVLESLPVASVVARVKALD
NDIGPNAEMEYRIMEDGPGVFNITTDEDTQEGVIILQKPLDFETKNSFNLRIEATNRNID
PAFVHLGSFSDTTSVKVTVEDVNEPPVFSTQLGKMVVSEDARVGISIGRVSAHDPDSSNS
AIRYSIDRNTDLERFFNVDALSGVISTAKPLDREVNSVHNLTILAMESHDPTQVGKGFAV
ITVLDINDNPPVFAIEYETLLCENAAPGQVIQTISAVDKDEPPSGHRFYFALPPSVAGNS
NFTLRDNKDNTASIVTKRGGFRRREQVLYRLPVLIVDSGSPALSSTNTLSVSVCDCDSDG
VAQSCGAVAYTLPAGLSTGALVAILGCIITLLVMVLLIVSMRRRKKEPLILEEERDVREN
IVRYDDEGGGEEDTEAFDMVALRNLNVIRDPKVRRDVTPDTPTFFPYPRSSSSLPVYKTL
PDNVVFREFIWDRLKDADVDPTAPPYDSLQTYAFEGNGSVAESLSSLESLSTDSEQNYDY
LSNWGPRFKKLADLYGDGKSVFS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggtgtggctcaggaagtgtgtggagagcaggtgctctcctggctctgctgctt
cccctctgggagctgggctgctgggggttgatctctgcctctggggcctctgggacacag
aaccaggtccagcacactgctggaggcccatgggagctgcttcgcaggcacaaacgcagc
tgggtatggaaccaattctttgtcctggaggagtacacaggtgaagaaccgctgtatgtt
ggcaagctccactcagatgtagacaaaggggatggcaaagtgaagtacgtgctctccggg
gagggctccacctccatcttcaccatcgacgagaacacgggggacatccacgccactaag
cgtctggaccgggaggagcaggcctattacaccctgcaggcccaggccgtggaccggctc
actaacatccctgtggagcccaggtcagagtttgttgtcaaggtccaggacatcaatgac
aatgagcccaagtttctggatggaccctacatggcaggggtaccagagatgtcagcactg
ggaacaacggtggtccaagtggcggccacagatgcagatgaccccacatatgggaacagt
gccagggtggtctacagcatcatcagcggacagccttacttctcagtcgacccaaaaaca
ggcgtcgtccggacggcactgcccaacatggaccgagaggtgaaggaccagtacgtgttg
gtcatccaggctaaagacatggtgggccagatgggcggcctctccggcaccacctctgtc
acggtcaccctcactgatgtcaatgacaacccgccacgcttctctcgtaagaactatcag
tacatggtgctggagtccttgcccgtggcgtccgtggtggccagggtcaaggctctggac
aatgacataggccccaatgcagagatggagtataggatcatggaggacggacctggggtg
ttcaacatcactacagacgaggacacgcaagagggcgtcatcatccttcaaaagccttta
gactttgagaccaagaacagctttaacctgcgaatcgaagccaccaatcggaatatcgac
cctgcgtttgtgcacctgggttcgttcagcgacaccacgtcggtcaaggtgacggtggaa
gacgtgaacgagccgcctgtgttctccacacagcttggcaagatggtggtctccgaggac
gccagagtgggcatctccatcgggagggtctccgctcacgaccctgactcctccaacagt
gccatcaggtactccatagacagaaacacagacctggagcgtttcttcaacgtggatgct
ctgagtggggtcataagcacagccaaacccctggatcgagaggtcaactctgtccacaac
ctcactatccttgccatggaaagccatgatccaacccaggttggaaaaggttttgctgtc
attacggtgctggacatcaatgacaaccctccggtatttgccattgagtatgagaccctc
ttgtgtgagaatgccgctcctggacaggtcatccagactatcagcgctgtggacaaggat
gagcctcccagtggtcatcgcttttacttcgccctgcctccatctgtggccggcaactcc
aacttcactctccgagacaacaaagacaacacggcgtccatcgtaacgaaacgtggagga
ttccgaaggcgggagcaggtgctgtaccgactgcccgtgttgatcgtagacagtggaagc
cccgcgctcagtagcaccaacaccctatcagtgagcgtgtgtgactgtgactcggacggc
gtagcccaatcatgtggggcggtggcgtacacacttcctgctggcctcagtacaggggcc
cttgtcgccattctgggctgcatcattacactcctggtgatggtgctgctgattgtgtcg
atgcgtcggaggaagaaggagcccttgatcctggaggaggagagggacgtgagggagaac
atcgtccgctacgacgatgaaggtggaggagaggaggacactgaggccttcgacatggtg
gccctccgcaacctcaatgtcatcagagaccccaaggttcggcgagacgtcacccctgac
acccccaccttcttcccctacccgagatcctcctcctcgcttcccgtctacaagaccctg
ccggacaacgtggtgttccgagagttcatttgggaccggctgaaggacgcagatgttgat
ccaacagctccgccgtatgactctttgcagacgtacgcctttgaggggaatggttcggta
gctgagtcgttaagctccctggagtcactaagtacagactcagagcagaactacgactat
ctcagcaactgggggccgcgcttcaaaaagctagccgacctctacggcgacggcaaaagc
gtgttctcatag
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