Oncorhynchus tshawytscha (Chinook salmon): 112227941
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Entry
112227941 CDS
T05605
Symbol
nfx1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112227941 (nfx1)
04121 Ubiquitin system [BR:
otw04121
]
112227941 (nfx1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112227941 (nfx1)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
112227941 (nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
112227941
NCBI-ProteinID:
XP_024248737
LinkDB
All DBs
Position
LG29:11520255..11550407
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AA seq
1123 aa
AA seq
DB search
MAEGSVTDSLDLNPDETSARQKCNQQQSRRGRNREGHNRNWSGSNNYGPAPQQQQQGHFH
HGVKQSHVHDNSTVPVNFHPPPYHQEDVSRGRGRGGRGAIGGGGGRGSRGQPPRWNRPGV
DTGPPGLPRGHHGLGGGGGYRPGTPPIDGPSWRRGDPGGRSVEVGPAHEDHQDTRPEKPR
RFSQEPRREERGARSAKGPPHSLEKQENHDSHATGGGGWDPAEPREETPPSEMGSRSRKG
GRAEERNPHVYAQQKFPEPKRRQGPIKEYPQEKDHERGARDIPSGHRDKLGSGTEEEPSW
RSQGRGQVRRTPLQDRGQRRTLNSDHRPGQKRWDNVPNKSKETQTGCLIEQLSEEKYECM
VCCEVIRVMAPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNV
YKCFCGKATNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPASVTKACT
CGRTSQPMRCGQATAIHCDKQCGATLNCSEHTCTQVCHSGLCQPCPLQVKQVCYCGVVSR
EVLCGTDKDRFDGSGHFCCQKACDKMLDCEAHRCEQVCHPGPCKPCPRSPRLVRCCPCGQ
TALAKLLELGYPERRGCSDPIPSCGKTCSKPLPCGSSETIHICEKLCHEGSCGPCSLTST
IKCKCGSKTKDVPCAVIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVAAEHKCSLICGY
KLNCGLHRCQELCHRGNCQPCWQTSFDELACHCGVSVLFPPIACGTKPPECKNPCTRRHE
CDHPVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLACNKVLLCDLHRC
RRICHRAECLAEGVCRQPCLLPRPNCGHPCNAPCHKGTSCPGSTCTAKVALQCDCGRRKE
TVVCTEAASAHQRYAAIAMASKLSDMQLGDSVDMGLITKKEMKHTKLECDEGCAALERNR
RLAEALQIDPSVDPFNMRSSSSTYSDSLRVDARKDFKFVSEIEEEIKNLVELTSKGKQSK
RSHCFPPMNREHRKLVHELAEAYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLMER
DTGVPRAPPPIAHIKHSSKADSVSSWSKAVKEEPVIDYFDVQD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctggatttgaatccagatgagacttcagcacga
caaaaatgtaaccagcagcaatccaggaggggtcggaacagagagggccacaaccgtaac
tggagtggttctaataattacggcccagcaccgcagcaacagcagcaaggccattttcac
catggggtcaaacaatctcatgtccatgacaattcaacggtccctgtaaatttccatcct
cctccctaccaccaagaggatgtatcaaggggtcgaggaagaggaggaagaggggctatc
ggaggtggagggggccggggctcaaggggccagcctccaaggtggaacaggcctggggtc
gacacaggcccccctggcttacctaggggccaccatggactgggtggtggtggtggctac
aggcctggaacaccccccatagacgggcctagctggcgtcgaggagaccctggtggccgg
agtgtagaggtggggcctgcccacgaagaccaccaggacacccgccctgaaaaacccaga
cggttcagccaggagccgcggagagaagagagaggtgcgaggagtgcgaaaggacctcct
cactctctggaaaagcaggagaaccacgacagccacgctacaggaggaggaggctgggac
cctgctgagcccagagaagaaaccccaccatcagaaatggggtccagaagccgaaaagga
gggagagccgaagaaaggaacccccacgtctacgctcaacagaaattccctgagcccaag
cgacgccaggggcctatcaaagaatatccccaggagaaggaccatgagaggggagccaga
gacatcccctctggccatcgtgataaactgggctctggcactgaagaggagcccagctgg
aggagtcaggggagaggccaggtgagacgcacccccctacaggacagaggccagaggaga
acactcaactcagaccacaggcctggacagaagaggtgggacaacgtgcccaacaagagc
aaggagactcagacaggttgcctgatcgagcagctgtctgaggagaagtatgagtgcatg
gtgtgctgtgaggtgatcagagtcatggctccagtctggagctgccacagctgcttccac
gtcttccatctcaactgcatcaagaagtgggcccgctccccagcctcccaggcagacgaa
acaaatgatgggtggcggtgtccggcctgtcagaatgttgtcttccaacccccgaacgtc
tacaagtgcttctgtggcaaagcaaccaacccagagttccagcgtagtgagatcccacac
agctgtggagacatgtgtgggaagaagaggagcggagcagactgcaagcacccctgtaac
attttgtgtcacccaggaccttgtccccagtgtcctgcttctgtcaccaaagcatgcacc
tgcggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaag
cagtgtggcgccaccctcaactgttccgaacacacctgtacccaggtgtgccacagcgga
ctgtgccagccttgcccgctacaggtcaagcaggtgtgctactgcggtgttgtgtctcgg
gaggtactctgtgggacagataaagaccgctttgatggctcaggtcacttctgctgtcag
aaagcatgtgacaagatgttggactgtgaggcccaccgctgtgagcaggtgtgccaccct
gggccgtgcaagccgtgcccacgctcccccaggcttgtaaggtgctgcccctgtgggcag
acggctctggccaagctcctggagctgggctaccccgaacgccgcggctgctccgacccc
atcccctcctgtggcaagacctgcagcaagcctctgccctgcggctccagcgagaccatc
cacatctgtgagaagctgtgccatgagggaagctgtggtccctgctcgctcacctccacc
atcaaatgcaaatgcggctctaagaccaaggatgttccctgtgcagtcatccagaatgaa
gatggactgatttttacttgtgagaagcgctgcctcaaaaaacgctcctgtggccgacac
aaatgtggcgagctgtgctgtgtggccgcggaacacaagtgctctctgatctgtggctac
aagctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccc
tgctggcaaaccagtttcgatgagctggcgtgccactgtggggtgagtgtcctgttcccc
cccatcgcctgtggcacgaagcccccagagtgtaagaacccgtgtaccaggaggcacgag
tgtgaccacccagtgttccacaactgccacagtgaggagaagtgcccaccctgtacctac
ctcactcagaagtggtgcatgggaaagcatgagcgaaggagcaacatcccgtgccacctt
caggacatctcctgtggcctggcctgtaacaaggttctgctgtgtgacctccaccgctgc
cgccgcatctgtcaccgggccgagtgtctggccgagggcgtctgccgccagccctgcctg
ctgccccggcccaactgtggccacccctgcaacgccccttgccacaagggcaccagctgc
ccgggcagcacctgcactgccaaggtggcgctacagtgcgactgcggtcggagaaaggaa
acggtggtgtgcacggaagcagccagtgcccatcagaggtatgcagccattgccatggcc
agtaagctgtctgacatgcagctgggtgactctgtagacatgggtcttatcactaagaag
gagatgaaacacaccaagttggagtgtgacgaggggtgtgctgcactggaaaggaacagg
cgattggctgaggccctgcagattgacccgtcagtggaccccttcaatatgcgctcctcc
tcctcaacgtacagtgacagcctcagagttgatgccagaaaagattttaagtttgtcagc
gagatagaagaggagatcaagaatctggttgagctgacaagcaagggtaaacagtccaaa
aggagccactgcttcccccctatgaaccgggagcacaggaagctagtccacgagctggcc
gaggcctacaacgtggagagtgtgagctacgacagcgagcccaaacgcaacgtagtcatc
accgccatcagggggaaatctgcctgtcctaactcaaccctgacctccctgatggagaga
gacactggggtcccgagggctcctccacccattgcccatatcaaacatagcagcaaggct
gacagtgtgagcagctggtccaaggcagtcaaagaagagccagtgattgactacttcgat
gtccaggattaa
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