Oncorhynchus tshawytscha (Chinook salmon): 112227963
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Entry
112227963 CDS
T05605
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112227963 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112227963 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112227963 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
V-set
Ig_CD22
C2-set_3
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
112227963
NCBI-ProteinID:
XP_042164867
LinkDB
All DBs
Position
LG29:complement(10669242..10703330)
Genome browser
AA seq
1627 aa
AA seq
DB search
MSGSTPFYQKHHRHYDRGYRSKELESAVSQYQSSSSSSYAARRSSSRASASAALSASSGH
VVALHERTTPIPCSYTRLSSSYSGLEESRLSPMPKRAKPTYLAMDKENQIIGYVVPIFRG
SQEYASGFSDTEEARVKESAGYMARRNLFTSGLEMERTEQTSRKVSMRESAERISLSKRI
YENEEHHKRMNKDSLMHAPEFVIKPRSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVTID
PMAHPGKYKLESSYNVHSLEINRCDFDDTAQYRVSAMNSKGELSSFASIVVKRFKGEVEE
ALPMPRPRSTDKDGLISEYGITFDTHIVDGFGVSFGREGETMSLGATVIISPNLARYQPE
VQWYRDDVLLQPSKWCHMHWSGDKATLTLTHLNKEDEGLYTLRITTKSKYETYSAYVFVR
DADAEVEGAPGAPLDVKCQDANKDYVIVTWKQPAVDGGSSILGYFVDRCEVGTTHWSQCN
DTPIKFARFPVTGLVEGRSYTFRVRAVNKSGMSRPSRVSEVVAAMDPADRARMRGTSAPW
TGQIIVTEEEPAEGVVPGKPKELEVTEATKNYVVLSWKPPGERGHEGIMYYVEKCVSGTD
SWQRVNTEIPVKSPRFALFDLAEGKAYSFRVRCCNSAGVGEPSEATEATTVGDKLDIPSA
PGRVVPTRNTDTSVVVSWEASRHAKELVGYYIEASIVGSNKFEPCNNKPVKGTRFICHGL
ATGESYVFRVKALNAAGLSECSQESEAIEVKAAIGGGIPHASPTPPYGISVLECVRDSMV
LAWKQPTFIGGADITGYFVDYREVINGVPGTWHEANVKSVSDRAYRVSDLKENRKYQFQV
RAANMAGVGIPSLPSGTFVCEEWTIAVPGPPHDLQVTEVRANTLVLLYKPPVYQGRDPVN
GFYIDIKEADAEEEAWRGVNEKAILTNYMKIKILKEGETYVFRVRAQNKAGVGKASEPTE
PVLAETKPGTTEIVVDVDDDGVISMNFACSNLTPDSKFVWSKNYEEITDDTRITVATSGG
KSKATFNMLAEDDIGIYSCAVTHTDGACSSYTLSAEELKKLLELSHDHKFPVIPLKTELA
VELQEKGRIRFWLQAEKISANGKIEYVFNDNSLSQGEKYKMNFNKDTGVIEMIMESLLPE
DEGTFTFQLQDGKATNQSSLVLIGDVFKGLQKESAFMRKEWHRKQGPHFVEYLSYEVTPE
CCVILKCKVGNIKKETVALWYKDGREVKGDEKLTFTEGVLKLEIAQISKKDAGVYEIVLK
DDRGQDTSTLNLTEQGFRDLMNEVFSNIANSSTALKIQSTDEGIRLYSFVSYYNEALQVT
WHHKDSAIAFTDRIKSGVVGEQLWLQITEPTEKDKGKYAIEFHDGKGGLKRTVELSGQAF
DDAYAEFQRLKAAAIAERNRARVAGGLPDVVTIQELKALNLTCNISGEPLPEVVWLKNER
EIVSDGHYVMKLEAGKYASFTITTVNTADSGKYSILVKNKYGTESADFTLVVTEGKGDLG
VTSYLTDADGNVIIGCKSRPTTPTERRKSVTGKKMQKRKDSVILQKPPEEKEGKKKEEKK
MEDKTDALPKTTDKKKAAPAVASRVGKQETLQQPTTTADEAKPDDVPTSEKPAEKPQINK
GKNDQDE
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatccacacctttctaccagaaacatcaccgccactatgaccgtggttaccgc
agcaaggagttggaatcggctgttagccagtaccagtcaagcagcagcagcagctatgcc
gcccgtcgcagcagcagcagagccagtgccagtgccgctctcagtgccagcagtggacat
gtcgttgcactgcatgaacgaacgacgcctatcccttgtagctacaccagacttagttcc
tcatactctggcctggaggagagcagactgagcccaatgcccaagagagccaagcccacc
tacctggctatggacaaagagaaccagattatcggctatgtagtgcccatcttcaggggc
agtcaggaatatgccagtgggttttcggatactgaggaggcccgggtgaaggagagtgct
ggatacatggcccggaggaatctgttcaccagtggtttggagatggagcggacggagcag
acgtctaggaaggtgtccatgcgcgaatcagccgagcgcatctccctgagcaagaggatc
tatgagaacgaggagcaccacaagcgtatgaacaaggatagcctgatgcacgccccagaa
tttgtgattaagcctcgctcccacacggtgtgggagaagcagtgtgtcaggctgcactgt
actgtctctgggtggcctgacccacgggttgtctggtacaaaaacaatgtgacaatcgac
ccaatggcccacccaggcaagtataagctagagagcagctacaacgtgcactcattggag
atcaacagatgtgatttcgatgatactgcacagtatcgtgtttctgccatgaacagcaag
ggagagctctcctcctttgcctccatcgttgttaagagattcaaaggagaggtagaggag
gctctccccatgcccagaccaaggtcaacagacaaagatggcctgatctctgagtatggc
atcacctttgatacccacatcgtggacgggtttggcgtgtcgttcggacgggagggcgag
accatgagcctgggcgccacagtcatcatctcccccaacctggcacgctaccagcctgaa
gttcagtggtacagagatgatgttcttctgcagccctccaagtggtgtcacatgcactgg
agtggagacaaggccacgctgaccctgacacacctgaacaaggaggacgagggtctctac
accctgcgcatcaccaccaagtctaaatacgagacctactcggcttacgtctttgtcaga
gatgccgatgcggaggttgagggagcccctggcgcccctctggacgtgaagtgtcaggac
gccaataaggattatgtcattgtgacctggaagcagccggctgtggacggtggcagctcc
atcctgggctactttgtggacaggtgtgaggttggcaccacccactggagccagtgcaac
gacacgcccatcaagtttgcccgtttccccgtgaccgggttggtggaggggcgctcctac
acattccgtgtgcgtgccgtcaacaagtctggcatgagccggccatcccgtgtctctgag
gtggtggcagccatggatcctgccgaccgcgcgcgaatgagaggtacctctgcaccctgg
accggccagatcattgtcactgaggaggagcctgcagagggcgtggtccccggcaaaccc
aaagaactggaggtcaccgaggccaccaagaactatgtggtcctgagctggaaaccccct
ggggagagaggccacgagggcatcatgtactatgtggagaagtgtgtgtcaggcacagac
agctggcagagggtgaacacagagatcccagtgaagtctcctcgcttcgccctgtttgat
ctggcggagggaaaggcctacagcttccgtgtgcgctgctgcaactccgccggcgttggc
gagccatcagaagccaccgaggccaccactgtcggggacaagctggatatcccgtctgcc
ccaggccgtgtggttcccaccaggaacacagacacatccgtggttgtgtcctgggaggct
tccaggcacgctaaggagctggtgggatactacatcgaggccagcatcgtgggtagcaac
aagtttgagccatgtaacaacaagcctgtcaaaggcaccaggtttatctgtcacggtctg
gcgacaggagagagctacgtgttcagagtgaaggcactgaacgccgctgggctcagcgag
tgttctcaggagtctgaggctattgaggtgaaggctgctattgggggcggtattcctcat
gcgtcccctactccaccctatggcattagcgttctggagtgcgtgcgggactctatggtg
ctggcctggaagcagcccaccttcatcggaggcgctgacatcaccggctacttcgtggac
taccgtgaggtcatcaatggggtgccagggacatggcacgaggccaacgtcaagtctgtc
agcgacagagcctacagagtgtctgacttgaaggagaacaggaagtatcagttccaggtg
cgtgctgccaacatggcaggcgtgggcatcccttctctgcccagtggaacgtttgtctgt
gaggagtggaccattgctgtgccaggacctccccatgatctgcaggtgacagaggtgcgc
gccaacactctggtgttgctttataagccaccagtgtaccagggccgtgacccagtcaac
gggttctacattgacatcaaagaggctgatgctgaggaggaggcttggagaggagtcaac
gagaaggctatcctcactaactacatgaagattaagattctaaaggagggggagacctat
gtgttccgtgtgcgtgctcagaataaggcaggtgtgggaaaggcctctgagcccacagaa
ccagtcctggccgaaaccaaaccaggcactacggagattgttgtggacgttgatgatgat
ggagtgatctccatgaactttgcctgctccaacctgactccagactccaaatttgtgtgg
tcaaagaactacgaagagatcacagacgatactcgtattactgtggcgaccagtgggggg
aagtccaaagccaccttcaatatgcttgcggaggatgacatcggcatttactcttgtgct
gtcacccacaccgatggtgcttgctccagctacactctctcagcagaggagttgaagaaa
ctgctggagctcagccacgaccacaaattccccgttattccattaaagacagagctggct
gtggagctgcaggagaagggccgaattcgcttctggctgcaggctgagaagatctctgct
aatggcaaaatagaatatgtgtttaatgacaacagtctctcccagggagagaaatacaag
atgaacttcaacaaggacacaggtgtgattgagatgatcatggagtctctgctcccagag
gacgagggaaccttcaccttccagctgcaggacggaaaagcaaccaaccagtccagcctg
gtgctgattggagatgtgttcaaggggctgcagaaggagtctgcgttcatgcgcaaagaa
tggcacagaaagcaaggtcctcactttgtggagtatctgagttatgaagtgaccccagaa
tgttgtgttatcctgaaatgcaaggttgggaacataaagaaagagactgttgcattgtgg
tacaaggatgggcgcgaggtcaagggagatgagaaactcaccttcaccgagggagtgctc
aaactggagattgctcagatctcaaagaaggatgccggtgtctatgagattgttctgaag
gatgacagagggcaggacacatccacgttgaatctgacagaacaaggtttcagggacttg
atgaatgaagtgttcagtaatattgccaactcctccactgcactgaagatccagagcaca
gacgagggcatcagactctactcctttgtcagttactacaacgaggcgctccaggtcacc
tggcaccacaaggattcagcgatagccttcacagaccgcattaagagtggtgtggtggga
gagcagctgtggctacagatcacagagcccacagagaaagacaagggcaaatacgccatc
gagttccatgatggaaagggcggtctgaagaggactgtagagctgtctggccaggcattt
gatgacgcatatgcagaattccagaggctcaaagcggccgctattgcagagagaaatcgt
gctcgtgtggcaggaggcctgcctgatgtcgtcaccatacaggagttaaaggccctgaac
ctgacctgtaacatttcgggcgaacccctgcctgaggtcgtctggctgaagaacgagagg
gagattgtgtctgatggccactacgttatgaagctcgaggcaggcaagtacgccagcttc
accatcaccacggtgaacacggcagactcgggcaagtacagcatcctggtgaagaacaag
tacggcacagagagcgccgacttcactttggttgtaacagaaggcaaaggggacttggga
gtgacctcctatttgactgatgctgatgggaacgtgatcattgggtgtaaaagcagacct
accaccccaacagagaggaggaagtcagtcactgggaagaaaatgcagaagagaaaggat
tccgtaatcctccagaagccaccagaggaaaaggaggggaagaagaaagaagaaaagaag
atggaggacaaaactgatgctttgccaaaaaccacagacaagaaaaaggctgcccctgct
gttgcaagcagggtcggcaagcaggagaccctgcagcagcccacaactacagcagatgag
gcgaagccagatgatgtccccacatctgagaaaccggcagagaaaccacagattaacaag
ggcaaaaacgatcaagatgagtga
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