Oncorhynchus tshawytscha (Chinook salmon): 112227976
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Entry
112227976 CDS
T05605
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
KO
K06560
mannose receptor, C type
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112227976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227976
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112227976
04090 CD molecules [BR:
otw04090
]
112227976
04091 Lectins [BR:
otw04091
]
112227976
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
C-lectin receptors
112227976
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112227976
CD molecules [BR:
otw04090
]
Proteins
112227976
Lectins [BR:
otw04091
]
C-Type lectins
Group 6: Mannose receptor family
112227976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Xlink
Chordopox_A33R
Ricin_B_lectin
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
112227976
NCBI-ProteinID:
XP_024248798
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All DBs
Position
LG29:complement(10149619..10166345)
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AA seq
1441 aa
AA seq
DB search
MASSPSLAVLLCLMHALRCTAEIDSSSFLIYNQDHNKCVVAVSASQVTVAPCDHTSQNQQ
FRWASQSRLLSISLKLCLGAQDLKDWVKVLLFPCDEKSELQYWQCKNETLFGLKDKALHL
NYGNRNEKNMMIYQGSGSWSCWKMYGTQKDLCSKGYQEVFTLGGNAFGSPCQFPFQFGEK
WYAECTPQGRSDGQLWCATETDYNKAKKWGFCPSKSSSGWDSDPVTGVLYQRNTQSVLTW
HQARKSCQQQGADLLSIVELHEQTYISGLTNILGTSLWIGLNSLDFEAGWQWSNGNPFRY
LNWAPGHPSTEPGLSCATLNAGKASKWETNECSKKLGYICRKGNSTTLASAPIVGKDQPT
FCTSHWIPYAGHCYYLQRTKKMWRDALAACHKDGGDLASIHNIEEQSFIISQSGYTATDE
LWIGLNDQRNALLFEWTDRSHVTFSHWQTGEPSHGANLQEDCVLIRGKDGKWADNLCEKT
YGYMCKKKASTKPVAGAPEEDSPGCKLGWIRYGSYCYNVGSETKTFDEAKQTCQRSDSIL
VEVADRYENAFLVSLVGLRPEKYFWTGLSNMADIDTFKWTTSSEVKFTHFNVGMPDRKQG
CVAMTTGMFAGLWDVVSCSNKEKYICKKMAEGVTSTMAPPTTPALSCPSGWSPAAKRNVC
YKLYRKETENKKSWSESREFCKAIGGDLMSIHSATDLNGSPYHSSDAAWIGLSNLDPSAG
FVWADGSAFSYENWGFGEPNDYNDNEKCAEVQFYYGHHWNDRHCDAYNDWICEIRKGVTP
KPHPTQVEPVYNTTKDGWIEYNDTQYFFNTENLPMDEAREFCKKNFGDLVVITAESERKF
IWKQISRGSEGQYYIGMTVGLDKSFSWLDGSPVVFTAWDQNEPNFANNDENCVTIYKSMG
YWNDINCGVELASICKRTTSFTNTTMAPTTVPKGGCVPEWIAFQGKCYKFIGDSDKKPWQ
EARTYCINQGGNLASVLSEKEQAFLTTQMLGNPQDIWIGLNDINWEMRFLWTEGRGVSYT
NWAKGHPTSVPDGRYSFMEEVFDCVVLVGSSQKQTGMWKVEDCLVPRGFICKRNIDSQIV
VPATTESTKTFYKLGNDSFKLVVQKMNWDEARRQCKADDAEMASILNPITQAFITMQIQK
CNGPVWIGLNNNLTEGHFKWVDNWPLSYTKWGEDEPKNNVACVYMDTDAKWKTGDCSNTY
SSLCKRSPDIAPSQPPQLPGNCPEPKKRKTWVPFRGYCYAFLNSVVDNWAHATVECLRMG
ASLVSVEDPLEASFIQKNLELLQDGSKSFWIGMHKSHEGDWMWIDNSVVDYTNWKQGMPK
SGEQCVEIQSDSGLWSTNSCNRYKSYICKTAKVITPTEKQPVAAPLVEEAPHGYAGIAVA
VVLVIITVVGLGAFLLRKRIPTPVLGECTFDNTLYFNNPIRPTATVDTKGLVANIEQNET
A
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagtccatccctcgctgtgctcctgtgccttatgcatgctctgcgctgcact
gctgagatagacagcagctccttcctgatctacaaccaggatcacaacaagtgtgtggtg
gcggtgagcgccagtcaagtcacagtggctccctgtgaccacacgtcccagaaccagcaa
ttccgctgggcctcacagtctcgtctcctcagcatctccctgaagctctgcctgggggct
caggacctgaaggactgggtcaaggtgctgctcttcccctgtgatgagaagagcgagctc
cagtactggcagtgtaagaacgagaccctgttcggcctcaaagacaaggcgctgcactta
aactatggcaaccgcaacgagaagaatatgatgatctaccagggatctgggtcttggagc
tgttggaagatgtatggtactcagaaggacctctgctccaagggctaccaagaggtgttc
acactaggggggaatgcctttggaagtccctgccagttcccctttcagtttggggagaag
tggtatgctgagtgcactccgcaggggcgctcagatggacagctctggtgcgccacagag
acagattacaataaagccaagaagtggggcttctgtccctcgaaatcgtcctcaggatgg
gacagtgacccagtgacaggtgtcctgtaccagagaaacacccagtctgtgttgacctgg
caccaggcgaggaagagctgccagcagcaaggagccgacctgctcagtatagtagagctc
cacgagcagacctacatctcagggttgaccaatatcctgggcacatctctgtggattgga
ctgaatagcctagactttgaggctggatggcagtggagcaatggaaacccattcagatat
ttaaactgggccccaggacatccatcaactgaacccgggctcagctgtgcaaccctgaat
gctggcaaggcctcgaaatgggagaccaatgaatgttccaagaagctgggatatatctgt
cgcaaaggaaactccactactctggcctctgcccctatagtaggaaaagatcagcccacc
ttctgcaccagtcactggattccctatgcaggccactgctactacctacaacgtaccaag
aagatgtggagggatgccctggccgcctgccacaaagatggaggggacctggccagcatc
cacaacatagaagaacaaagcttcatcatctctcagtcaggatatacggccacagatgag
ctgtggattggcctgaacgaccaaaggaacgcgctgctgtttgagtggacagaccgatcc
catgtgacattcagccactggcagacaggggagccctcccatggtgccaacctccaggag
gactgtgtcctgatcagaggaaaggatgggaagtgggctgataatttgtgtgagaagacc
tacgggtacatgtgtaagaaaaaggcctccaccaaaccggtggcaggtgccccagaggaa
gatagtccaggatgtaagctgggctggatccggtatggttcttactgctacaacgttgga
tcagaaaccaaaacatttgatgaggccaagcagacctgccagcggagtgactcaatcctg
gtggaagtggctgacaggtatgaaaatgccttcctggtcagtttggtgggtttgaggccg
gagaagtacttctggactggactttccaacatggcggatatagacacgttcaagtggact
accagttcggaggtcaagttcacccacttcaacgtgggcatgccagacagaaaacaaggc
tgcgtagctatgacaactggaatgtttgcgggactatgggatgtggtcagctgcagcaac
aaggagaagtacatctgtaagaaaatggcggagggcgtcacatcaacaatggcccctccc
accaccccggcactgagctgtccttctgggtggtcacctgctgctaaaaggaatgtctgt
tacaagctttacagaaaagagactgaaaacaagaagtcatggtcagagtcgcgggaattc
tgcaaggccattggtggtgatctgatgagcattcacagtgccacagacctgaacggctct
ccgtatcattcctctgatgcagcctggattggcctcagcaatctggatccttctgcaggt
ttcgtctgggctgacggttcagcattcagctatgagaattggggatttggagaaccaaac
gactacaacgataatgaaaaatgcgcagaggtccagttttactacggacaccactggaat
gatcgacactgtgatgcctacaatgactggatttgtgagattcgcaaaggggttacccca
aagccccatcccactcaagttgagccagtgtacaacactacaaaggacggctggattgag
tacaacgacactcagtatttcttcaacactgagaatctccccatggacgaggcgagagaa
ttctgtaaaaagaactttggtgacctggtggtcattactgcagagagcgagaggaagttt
atatggaaacagatatctagaggatccgagggacaatattacattggaatgaccgttggt
ttggataagtcttttagctggttggatgggtctcctgttgtgtttaccgcgtgggatcaa
aacgaacccaacttcgccaacaacgatgagaactgtgtgacgatatacaagagtatgggg
tactggaatgacatcaactgtggcgtagagctggcctccatttgtaaaagaaccaccagt
ttcactaacacgaccatggcccccaccactgtacccaagggaggttgtgtcccagaatgg
attgctttccaggggaagtgctacaaattcattggagacagtgataagaagccgtggcag
gaggccaggacctactgcattaaccagggagggaacctggcctctgtcctcagcgaaaaa
gagcaagcattccttaccacccagatgcttgggaatcctcaggacatttggataggtctg
aacgacatcaactgggagatgcgcttcctatggacggaggggagaggggtttcctatacc
aactgggcaaaagggcatccaacgtcagtgccagacggacgatattcatttatggaagag
gtgtttgactgtgtggttctggtaggcagctctcaaaaacagacaggaatgtggaaggtc
gaggattgcttagtaccccgtggtttcatctgcaaaaggaatattgattctcagattgtg
gtccctgccaccacagagtcaacgaagacgttctacaagctgggaaatgactccttcaaa
ctggtggtccagaagatgaactgggacgaggcccggaggcaatgtaaagcagacgatgca
gagatggctagcatcctgaaccccatcacccaggccttcatcacaatgcagatccaaaaa
tgcaatgggcccgtgtggattggcctcaacaacaatttgactgaagggcattttaagtgg
gtggataactggcctctatcttacaccaaatggggtgaagatgagccaaagaacaatgtg
gcctgtgtttacatggatacagacgccaagtggaagacaggcgactgtagtaacacctac
tcctcactgtgcaagagatcaccagacatagcccccagccagccccctcagctccctggc
aactgccccgagcccaagaaacgcaagacgtgggttcccttcaggggttactgctacgcc
ttcctcaactctgtggtggacaactgggcccacgccactgtggaatgtctccgaatggga
gcatccctggtgagtgtcgaggatcccttggaggccagcttcatccagaagaaccttgag
ctactgcaggacggatccaagtcattctggattggcatgcacaagagccacgaaggtgac
tggatgtggattgacaacagtgtggtggactataccaactggaaacaagggatgccaaag
agtggagaacaatgtgtggagatccagtctgatagtggtctgtggagcactaacagctgc
aaccggtacaagtcgtacatctgcaaaacagccaaagtcatcacaccaacagagaagcaa
ccagttgctgctcccctagtggaggaagctccccatggttatgccggcatcgctgtggca
gtcgtcttggtgataatcacagtggtaggactcggagccttcctactccgcaaacggata
cctacccccgtcctgggagagtgtactttcgacaacaccttgtacttcaacaaccccatc
cgcccaacagccactgtggacaccaagggcctggtggccaacatagagcagaacgaaaca
gcttag
DBGET
integrated database retrieval system
