Oncorhynchus tshawytscha (Chinook salmon): 112227977
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Entry
112227977 CDS
T05605
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
KO
K06560
mannose receptor, C type
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112227977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227977
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112227977
04090 CD molecules [BR:
otw04090
]
112227977
04091 Lectins [BR:
otw04091
]
112227977
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
C-lectin receptors
112227977
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112227977
CD molecules [BR:
otw04090
]
Proteins
112227977
Lectins [BR:
otw04091
]
C-Type lectins
Group 6: Mannose receptor family
112227977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Xlink
Chordopox_A33R
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
112227977
NCBI-ProteinID:
XP_042164341
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All DBs
Position
LG29:complement(10105833..10131102)
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AA seq
1440 aa
AA seq
DB search
MASSPSLAVLLCLMHALRCTAEIDSSSFLIYNQDHNKCVVAVSASQVTVAPCDHTSQNQQ
FRWASQSRLLSISLKLCLGAQDLKDWVKVLLFPCDEKSELQYWQCKNETLFGLKDKALHL
NYGNRNEKNMMIYQGSGSWSCWKIYGTQKDLCSKGYQEVFTLGGNAFGSPCQFPFQFGEK
WYAECTPQGRSDGQLWCATETDYNKAKKWGFCPSKSSSGWDSDPVTGVLFQRNTQSVLTW
YQARKSCQQQGADLLSIVELHEQTYISGLTNILGTSLWIGLNSLDFEAGWQWSNGNPFRY
LNWAPGHPSTEPGLSCATLNAGKASKWETNECSKKLGYICRKGNSTTLASAPIVGKDQPT
FCTSHWIPYAGHCYYLQRTKKMWRDALAACHKDGGDLASIHNIEEQSFIISQSGYTATDE
LWIGLNDQRNALLFEWTDRSHVTFSHWQTGEPSHGANLQEDCVLIRGKDGKWADNLCEKT
YGYMCKKKASTKPVAGAPEEDSPGCKLGWIRYGSYCYNVGSETKTFDEAKQTCQRSDSIL
VEVADRYENAFLVSLVGLRPEKYFWTGLSNMADIDTFKWTTSSEVKFTHFNVGMPDRKQG
CVAMTTGMFAGLWDVVSCSNKEKYICKKMAEGVTSTMAPPTTPALSCPSGWSPAAKRNVC
YKLYRKETENKKSWSESREFCKAIGGDLMSIHSATDLNGSPYHSSDAAWIGLSNLDPSAG
FVWADGSAFSYENWGFGEPNDYNDNEKCAEVQFYYGRHWNDRHCDAYNDWICEIRKGVTP
KPHPTQVEPVYNTTKDGWIEYNDTQYFFNTENLPMDEAREFCKKNFGDLVVITAESERKF
IWKQISRGSEGQYYIGMTVGLDKSFSWLDGSPVVFTAWDQNEPNFANNDENCVTIYKSMG
YWNDINCGVELASICKRTTSFTNTTMAPTTVPKGGCVPEWIAFQGKCYKFIGDSDKKPWQ
EARTYCINQGGNLASVLSEKEQAFLTTQMLGNPQDIWIGLNDVNSEMRFLWTEGRGVSYT
NWAKGHPTSVPDGRYSFMEEVFDCVVLVGSSQKQAGMWKVEDCLVSRGFICKRNIDSQIV
VPATTESTKTFYKLGNDSFKLVVQKMNWDEAQRQCKADDAELASILNPITQAFITMQSHK
YNEPMWIGLNNNLTEGRFKWVDNWPLSYTKWGEDEPKNNVACVYMDTDAKWKTGDCSNTY
SSLCKRSPDIAPSQPPQLPGNCPEPKKRKTWVPFRGYCYAFLNSVVDNWAHATVECLRMG
ASLVSVEDPLEARFIQENLELLQDGSKSFWIGMHKSHEGDWMWIDNSVVDYTNWKQGMPK
SEQCVEIQSDSGLWSTNSCNRYKSYICKTAKVITPTEKQPVAAPLVEEAPHGYAGIAVAV
VLVIITVVGLGAFLLRKRIPTPVLGECTFDNTLYFNNPIRPTATVDTKGLVANIEQNETA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagtccatccctcgctgtgctcctgtgccttatgcatgctctgcgctgcact
gctgagatagacagcagctccttcctgatctacaaccaggatcacaacaagtgtgtggtg
gcggtgagcgccagtcaagtcacagtggctccctgtgaccacacgtcccagaaccagcaa
ttccgctgggcctcacagtctcgtctcctcagcatctccctgaagctctgcctgggggct
caggacctgaaggactgggtcaaagtgctgctcttcccctgtgatgagaagagcgagctc
cagtactggcagtgtaagaacgagaccctgttcggcctcaaagacaaggcgctgcactta
aactatggcaaccgcaacgagaagaatatgatgatctaccagggatctgggtcttggagc
tgttggaagatatatggtactcagaaggacctctgctccaagggctaccaagaggtgttc
acactaggggggaatgcctttggaagtccctgccagttcccctttcagtttggggagaag
tggtatgctgagtgcactccgcaggggcgctcagatggacagctctggtgcgccacagag
acagattacaataaagccaagaagtggggcttctgtccctcgaaatcgtcctcaggatgg
gacagtgacccagtgacaggtgtcctgttccagaggaacacccagtctgtgttgacctgg
taccaggcgaggaagagctgccagcagcaaggagccgacctgctcagtatagtagagctc
cacgagcagacctacatctcagggttgaccaatatcctgggcacatctctgtggattgga
ctgaatagcctagactttgaggctggatggcagtggagcaatggaaacccattcagatat
ttaaactgggccccaggacatccatcaactgaacccgggctcagctgtgcaaccctgaat
gctggcaaggcctcgaaatgggagaccaatgaatgttccaagaagctgggatatatctgt
cgcaaaggaaactccactactctggcctctgcccctatagtaggaaaagatcagcctacc
ttctgcaccagtcactggattccctatgcaggccactgctactacctacaacgtaccaag
aagatgtggagggatgccctggccgcctgccacaaagatggaggggacctggccagcatc
cacaacatagaagaacaaagcttcatcatctctcagtcaggatatacagccacagatgag
ctgtggatcggcctgaacgaccaaaggaacgcgctgctgtttgagtggacagaccgatcc
catgtgacattcagccactggcagacaggggagccctcccatggtgccaacctccaggag
gactgtgtcctgatcagaggaaaggatgggaagtgggctgataatttgtgtgagaagacc
tacgggtacatgtgtaagaaaaaggcctccaccaaaccggtggcaggtgccccagaggaa
gatagtccaggatgtaagctgggctggatccggtatggttcttactgctacaacgttgga
tcagaaaccaaaacatttgatgaggccaagcagacctgccagcggagtgactcaatcctg
gtggaagtggctgacaggtatgaaaatgccttcctggtcagtttggtgggtttgaggccg
gagaagtacttctggactggactttccaacatggcggatatagacacgttcaagtggact
accagttcggaggtcaagttcacccacttcaacgtgggcatgccagacagaaaacaaggc
tgcgtagctatgacaactggaatgtttgcgggactatgggatgtagtcagctgcagcaac
aaggagaagtacatctgtaagaaaatggcggagggcgtcacatcaacaatggcccctccc
accaccccggcactgagctgtccttctgggtggtcacctgctgctaaaaggaatgtctgt
tacaagctttacagaaaagagactgaaaacaagaagtcatggtcagagtcgcgggaattc
tgcaaggccattggtggtgatctgatgagcattcacagtgccacagacctgaacggctct
ccgtatcattcctctgatgcagcctggatcggcctcagcaatctggatccttctgcaggt
ttcgtctgggctgatggatcagcattcagctatgagaattggggatttggagaaccaaac
gactacaacgataacgaaaaatgtgcagaggtccagttttactatggacgccactggaat
gatcgacactgtgatgcctacaatgactggatttgcgagattcgcaaaggggttacccca
aagccccatcccactcaagttgagccagtgtacaacactacaaaggacggctggattgag
tacaacgacactcagtatttcttcaacactgagaatctccccatggacgaggcgagagaa
ttctgtaaaaagaactttggtgacctggtggtcattactgcagagagcgagaggaagttt
atatggaaacagatatctagaggatccgagggacaatattacattggaatgaccgttggt
ttggataagtcttttagctggttggatgggtctcctgttgtgtttaccgcgtgggatcaa
aacgaacccaacttcgccaacaacgatgagaactgtgtgacgatatacaagagtatgggg
tactggaatgacatcaactgtggcgtagagctggcctccatttgtaaaagaaccaccagt
ttcactaacacgaccatggcccccaccactgtacccaagggaggttgtgtcccagaatgg
attgctttccaggggaagtgctacaaattcattggagacagcgataagaagccgtggcag
gaggccaggacctactgcatcaaccagggagggaacctggcctctgtcctcagcgagaaa
gagcaagcattccttaccacccagatgcttgggaatccccaggacatttggataggtctg
aacgacgtcaactcggagatgcgcttcctatggacagaggggagaggggtttcctatacc
aactgggcaaaagggcatccaacgtcagtgccggacggacgatattcatttatggaagag
gtgtttgactgtgtagttctggtgggcagctctcaaaaacaggcaggaatgtggaaggtc
gaggactgcttagtatcccgtggtttcatctgcaaaaggaatattgattctcagattgtg
gtccctgccaccacagagtcaacgaagacgttctacaagctgggaaatgactccttcaaa
ctggtggtccagaagatgaactgggacgaggcccagaggcaatgtaaagcagatgatgca
gagttggctagcatcctgaaccccatcacccaggccttcatcacaatgcagagccacaaa
tacaatgagcccatgtggatcggcctcaacaacaacttgactgaagggcgttttaagtgg
gtggataactggcctctatcttacaccaaatggggcgaagatgagccaaagaacaatgtg
gcctgtgtttacatggatacagacgccaagtggaagacaggcgactgtagtaacacctac
tcctcactgtgcaagagatcaccagacatagcccccagccagccccctcagctccctggc
aactgccccgagcccaagaaacgcaagacgtgggttcccttcaggggttactgctacgcc
ttcctcaactctgtggtggacaactgggcccacgccactgtggaatgtctccgaatggga
gcatccctggtgagtgtcgaggatccattggaggccagattcatccaggagaaccttgag
ctactgcaggatggatccaagtcattctggattggcatgcacaaaagccatgaaggcgac
tggatgtggattgacaacagtgtggtggactataccaactggaaacaagggatgccaaag
agtgaacaatgtgtggagatccagtctgatagtggtctgtggagcactaacagctgcaac
cggtacaagtcgtacatttgcaaaacagccaaagtcatcacaccaacagagaagcaacca
gttgctgctcccctagtggaggaagctccccatggttatgccggcatcgctgtggcagtc
gtcttggtgataatcacagtggtaggactcggagccttcctactccgcaaacggatacct
acccccgtcctgggagagtgtactttcgacaacaccttgtacttcaacaaccccatccgc
ccaacagccactgtggataccaagggcctggtggccaacatagagcagaacgaaacagct
tag
DBGET
integrated database retrieval system
