KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112227986
Entry
112227986         CDS       T05605                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144  Endocytosis
otw04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112227986 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    112227986 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112227986 (chmp4c)
   03400 DNA repair and recombination proteins [BR:otw03400]
    112227986 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112227986 (chmp4c)
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112227986 (chmp4c)
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112227986 (chmp4c)
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112227986 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   112227986 (chmp4c)
SSDB
Motif
Pfam: Snf7 Kinesin_assoc PAXIP1_C FapA
Other DBs
NCBI-GeneID: 112227986
NCBI-ProteinID: XP_024248825
LinkDB
Position
LG29:9496282..9498279
AA seq 239 aa
MSKISKLFKGSSSSSSSSHYPSSSKSKHGHRSRTGPTPQEAIHKLRETEAMLAKKQDFLE
NKIEQEIMTAKKNGLKNKRAALQALKRKKRFEQQLTQIDGTLSTIEFQREALENANTNTE
VLKTMGYAAKAIKGVHQNMDLDKIDSLMQDITESQEVAQEICDAISRPFGDAFDEDELLA
ELAELELEESMTNMGRVPSVPAAKLPTSKLPSTRPSQRTPSKKRAEDDDDMQMLAAWAV
NT seq 720 nt   +upstreamnt  +downstreamnt
atgagcaaaatttctaaattgttcaagggaagctcaagttcgagctcttctagccactat
ccaagctcttcgaagtcgaaacatggccatcggtctcggacaggacctaccccgcaggag
gccattcacaaacttcgagaaacagaggcgatgctggcgaaaaaacaggacttcttggaa
aataaaattgaacaagaaattatgacggcaaagaagaatggcctcaagaataaacgtgcg
gccctccaggcactgaagaggaagaagcgctttgagcagcagctcacccagattgacggg
accctctccaccatcgagttccaaagggaggcattggagaatgccaacaccaacactgag
gtcctgaagaccatgggctacgctgccaaggccatcaagggggtccaccagaacatggat
ctggataaaattgactctctgatgcaggacatcactgagtcgcaggaagtggcccaggag
atctgtgatgctatctcccgacctttcggagatgcatttgatgaggatgagctgttagcg
gagctggcagagttggagctggaggagagcatgacgaacatgggcagagtgcccagtgtg
cccgctgccaagctgcccacctccaagctgccctcaactcgacccagccagcgcactcca
tccaagaagagggcagaggatgatgacgacatgcagatgctggcagcctgggcagtgtaa

DBGET integrated database retrieval system