Oncorhynchus tshawytscha (Chinook salmon): 112227988
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Entry
112227988 CDS
T05605
Symbol
myripb
Name
(RefSeq) rab effector MyRIP
KO
K22237
Rab effector MyRIP
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227988 (myripb)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112227988 (myripb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
Motif
Other DBs
NCBI-GeneID:
112227988
NCBI-ProteinID:
XP_042164650
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All DBs
Position
LG29:9430846..9472804
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AA seq
836 aa
AA seq
DB search
MAETLTVALRVAEEAIEEAIAKAEEFTDSLEKQNEARYLRDHKEELIEELATTIVQKIIQ
RRKRSEMQTEYDFVWPQSQGQPQGSEMSSPSQPPHSTLAQANQAHLKSSYSLWRSRSAFS
LTSDDSPEKNTEALVGAGGGGGVQDYASLKKETARASSLPSWKSVDRLDNSSASSVLQSP
DGNWIALQSSQHSRPSLLTKRKSLVFSVLEKESDVVSAYDEMGPESDQEDDKGGWGAALR
QFQRKLSDETYYTDSQHDPEWTYTPVHLPVTSPSSGQYTNTETLNSDSECSSVPPTRPGK
PLQNVMKKTGPNNQDPYLHPQQAQYHHHQHQHQNLPLYSLHPEALDVNFNPKVTGDSGQS
NHVRRSRRRRKSKRELVGNQAHAQTHTPPLYSSSAQENSFLLNALLKSGMSEEMPGPDVG
PVPETSSAVMTPEPKNQDTVAPNSAAPSSPNCMAPAPGPLSPSSSGPGSGDTLEQELYSK
LGQLVGRASSEEVASSSEDEPIKSPVKRDRESDRQKEKLRQIERERDPQGQSERQSSKSR
DRTKRETSESVNGPELKKRERLRESLTLRQEERVKERRLERGGKSLEEKVDGRENKTVEK
NRQSKRLQRKEVDRETERKGEEVEDRNQKTGSTPSSPAITPSIQEGVLCDGQKYSAASLC
SITTEVLKVLNATEELIGEAGGDSVTPSECMSASESFLSNLETRKLDQKLTKMEENVYMA
AGAVYGLEGALGDLEKVARGISSGTSDRDLAFLEDQVATAAAQVQQSELQVSDIEERILS
LKTAGLNVTTCNRFSNFSKPKPTPQTLDTSRQQRRKLPAPPVKDKESEQQVTALHP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccctcactgttgccctgcgtgttgctgaggaggccatagaggaagccatc
gccaaggcagaggaatttactgacagcttggagaagcagaatgaggctcgctacctacga
gaccacaaagaggagcttatagaggaacttgccacgaccatcgtacaaaagatcatccag
aggaggaagcgttcagagatgcagacagagtatgactttgtttggccccagagccagggc
cagccccagggcagtgagatgtcctcccccagccagccccctcacagcaccctggcccag
gccaaccaggcccacctcaagagttcctattccctctggaggtcgcggtctgcgttctcc
ctgaccagtgacgattctccagagaagaacacagaggcactagtaggggcggggggaggt
ggaggggtacaggactacgcctctctgaagaaggagaccgctagggcctcctcactgccc
agctggaagagtgtggaccgcctggacaactccagtgcgtcctcggtgctgcagagcccg
gacggtaactggatcgctctgcagagctctcagcactcccgtcccagcctgctgaccaag
agaaagtctctggtgttcagcgtcctggagaaggagtccgacgtggtctcggcctacgac
gagatgggccccgaatccgaccaggaggacgacaaggggggctggggggccgcgctccgc
cagttccaacggaaactctccgacgagacgtactacacggactcccagcacgaccctgag
tggacgtacacaccggtccacctcccggtcacatcgccctcctcgggccagtacaccaac
accgagaccctcaactctgactcagagtgttcctctgtaccacccacccgacccggcaaa
cccctccagaacgtaatgaagaagacaggccctaataaccaggacccgtatcttcatccc
cagcaagctcagtaccaccatcatcagcatcaacaccagaacctccctttgtactcgctc
cacccggaggcgctggatgtgaactttaaccccaaggtgactggagacagtgggcaaagc
aaccacgtcaggaggtcgcggagacgcaggaagagcaagagggagctggtggggaaccag
gcccacgcacagacacacacaccacccctttattcgtcatctgcacaggagaacagtttc
ctgctgaacgccctgctgaagagtggcatgagtgaggagatgcctgggcctgacgtgggg
cccgtgcccgagacctcctctgcggttatgacccccgagcccaagaaccaggacactgtg
gcccctaactctgcggcacccagctcccctaactgcatggcccctgcccctggccccctg
tcccccagcagctctgggcccggctcgggagacacactggagcaggagctctactccaaa
ctgggccagctggttggaagagccagcagcgaggaagtagcgagctcgtccgaggatgag
ccaatcaaaagtcccgtaaagagagacagagaaagtgacagacagaaagagaagctgagg
cagattgagagagagcgagatccccagggacaaagtgagagacagagcagtaaaagtagg
gataggacgaagcgagagacgtctgagtcagtgaacgggccggaactgaaaaagagagag
cgactaagggaaagtctgacattgagacaggaggagagagtgaaggagaggaggttggag
agaggaggaaagagtttggaagagaaagtagatggcagggaaaataagacagtggagaag
aacaggcaaagtaagagactacagagaaaagaggtggacagagagaccgaaagaaagggg
gaagaagtggaagaccgaaaccaaaagacaggatccacgccctcctcgcctgcaattacc
ccatctatccaggaaggggtgctgtgtgacggacagaagtactcggccgcatcgctgtgc
agtatcaccacagaggtactgaaggtgctcaacgccacagaggaactgattggtgaggcg
gggggtgatagtgtcaccccctctgagtgcatgagcgcgtctgagtccttcctcagcaac
ttagagaccaggaagctggaccagaaactcaccaagatggaggaaaacgtgtacatggct
gcgggggcggtgtacggcctggagggggcactgggggacctggagaaggtggcccgaggc
atcagcagtggcacctcagacagagacctggccttcctggaggaccaggtggccactgct
gccgcccaggtgcagcagtctgagctccaggtatcagacatcgaggagaggatattatct
ttaaaaacagctggactgaatgtcaccacctgcaatcgtttctccaacttctccaagcca
aaacctacgcctcaaacccttgacacatcacgccaacagaggagaaaactacctgcccct
ccggtcaaagataaggagtctgagcagcaggtaacagcacttcatccgtag
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