KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112228005
Entry
112228005         CDS       T05605                                 
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
  KO
K11988  sonic hedgehog
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    112228005 (shha)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:otw01002]
    112228005 (shha)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:otw00536]
    112228005 (shha)
Peptidases and inhibitors [BR:otw01002]
 Cysteine peptidases
  Family C46: hedgehog family
   112228005 (shha)
Glycosaminoglycan binding proteins [BR:otw00536]
 Heparan sulfate / Heparin
  Morphogens
   112228005 (shha)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint Hom_end_hint Intein_splicing Ribosomal_S6e
Other DBs
NCBI-GeneID: 112228005
NCBI-ProteinID: XP_024248872
UniProt: A0A8C8CYK8
LinkDB
Position
LG29:8294003..8302616
AA seq 421 aa
MDEMLLLTRIVLVGLISLSLVSSGMGCGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGTASVTLKDGSRKAVKDLRVGDKVLAANSDGNLAYSD
FIMFVDQDSATRRVFYVLETKEPAQKIILTAAHMLFVVNNSTDDLHSMSAVFASKVKPGQ
KVVVFDDLHNQLKSVTVERIYTEEHEGSFAPVTVQGTIVVDQVLASCYAVIEDHNLAHLA
FAPVRMSYWLSSLLSPKDYSMPNATLHEDGVHWYSKILYQLGTWLLDSHALHPLGMSINS
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacgaaatgctgctgttgacaagaatcgttctggtcgggttgatctccttgtccttg
gtgtcctctgggatgggttgtggaccgggcaggggctacgggaggagaaaacatccgaag
aagctgacacctcttgcgtacaagcagttcatcccaaacgtcgcggagaagaccctgggg
gccagtggcagatatgaagggaagatcacacggaactccgagcgatttaaagaactgact
cccaattacaatactgacattatcttcaaggatgaagagaacaccggtgcggacaggctc
atgactcagagatgtaaagacaagctgaattccctggctatctctgtcatgaatcagtgg
ccaggggtcaagctccgcgtcaccgagggctgggacgaggatgggcaccatttcgaagag
tccctacactacgagggaagggcagtggatatcacgacctccgatagagacaagagcaaa
tacggcacgctgtccagacttgcagtggaggctggattcgactgggtctactacgagtcc
aaggcccacatccactgttctgtcaaagcagaaaactcagttgctgccaaatcaggaggc
tgtttcccaggcaccgcttcggtaactctcaaagatggaagcaggaaggcagtgaaagac
ctcagagttggcgacaaagtgctggcagccaacagtgatgggaacctcgcatatagcgac
ttcatcatgttcgtggaccaggactctgcaaccagaagagtgttttatgtgctagagact
aaagaaccagcccagaaaatcatccttactgctgcacatatgctctttgtggtcaacaac
tcaacggatgatctccacagcatgtcagcagtatttgcgagcaaagtcaaacctggacaa
aaggtggtcgtctttgatgatttgcataaccaactgaagtcggtcaccgtggaacggatt
tacacggaggagcacgaggggtcatttgcgcctgtgacggttcaaggaaccatcgtggta
gatcaggtgcttgcgtcatgttacgcggtaattgaagaccacaatctagcgcacctggcg
tttgcacctgtcagaatgagctactggctgtcctcgttgctatccccgaaagactactcc
atgcccaacgccaccttacacgaggacggagtgcactggtactccaagattctatatcaa
ttaggaacgtggctcttggatagccacgcgcttcacccactggggatgtcaataaactca
agttga

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