Oncorhynchus tshawytscha (Chinook salmon): 112228015
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Entry
112228015 CDS
T05605
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112228015 (dync2i1)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Dynein and associated proteins
112228015 (dync2i1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
112228015
NCBI-ProteinID:
XP_024248894
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Position
LG29:complement(7623280..7640338)
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AA seq
1095 aa
AA seq
DB search
MPTDKKITKEDTWKSDDLRRHIRGGGHDEDSSSSRRRDDERRHRTGESVERRHRDPEREA
RREREKNRERDGTGERTKPRDADKDRHQDRRKDGSRDRMGEKEERDKERSRAQDRVIKGT
ENVKYRNGDRDSRDKMHDREEKENRDRERVKARERDTERTRERERDALRKSDRDKEKEKN
KESETGERDRERKSDRDRKRNEERAEGGRDRDREHDREKRDRRKEREYLKESEGYKDRSQ
KDKERKERHMDKEHSGQKEEREYREQHRKEKEEKERRHKERAQHNTGESRRHDGESREVE
SERVHRERKGSDREREGKRDKHRERRHREEAIPERDPTERNSAKKSSSSSDLRVHKDKTE
PVKTKEVVMRSESAWRSSQKQLSDTEEPVEIAEAPAEDRGYDEAQDYEEDFEKMDYEEDF
EDVDDSEGEDEKQTRSHEEREAREEISSQRREEIEAIQRAMDEENERVGSAQPRLSTEED
DRPKRSRDSETPQSKVSQHGRFMDFVAAKHREVSKKVASKQKKRSTELLRLIDLDYSITF
SLLDLPPVNEYDMYIKNFGTTNTKQAYVQCNEDNTDRDIQTEEIEMSEKWTQHPAERNVG
CGGPKLSHEASDESVTKLSIDSQRLATFLRSASQVVAVLLEEDRAEKQSLKKLRTQADTL
SFSDGCLQLNTKLPFLYGRQISLVQFSQVQRQTMLSVHNPSAKPSAVRLDSKTIICIWNI
WEPSRPQKILVYESEVQCCCFSPGKATLVFAGTSVGSVVLWDLREHASAHYTLRIGENDW
TLRHPTFSTDAVLAASGHMSSVSSVEAVLATVAEGLRPELPLLASDEESSGLSFQLASLD
GNGVLNLWVVLELPKANDAGSHTDLGLRPGGKVKLLHSSTVITTSERSSARDAKKTTLLQ
TLLLKFLPSDSNHFFIGTNMGLVNHGTSHGLKAPPKFYRPQVVGFRPVDVTSIDFSPFGE
PIFLVGCGDGSVRLHTVLSEQPLMEWTSSTAGQPVLSVQWAQTRPTVFCVLDAASYLHIW
DLLEKDFEPVITEKIDADRVTAMAVFGDPAKQNTYSGISLATQSGKIEMQYFSKRLTVPE
SADLEKLQIMMQEAF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgataagaaaataacaaaggaagatacatggaaatcagatgaccttaggagg
cacataaggggtggaggacacgatgaagactctagcagcagcaggaggagagatgatgag
agaagacacaggacgggggagtcagtcgagcgacgccacagagacccagagagggaggcc
agaagggagagagagaagaacagagagagagatgggaccggagagagaacaaaacccaga
gatgcagacaaggacaggcatcaagacagaaggaaagacggctcgagagacaggatgggc
gaaaaggaggagagagacaaagaaaggagcagagcgcaagatagggttattaaaggcaca
gagaatgttaagtacaggaatggggacagagacagtcgggacaaaatgcatgatagagaa
gaaaaagaaaacagggatagggagagggtaaaggccagagaaagggatacggagaggaca
agggagagggaaagagatgcgctgaggaagagcgacagggataaagagaaggagaaaaac
aaggagagtgaaacaggggaaagggacagggagcgaaagtctgacagagatagaaagaga
aatgaggagagggcggagggagggagagacagggatagagagcatgatcgtgagaagaga
gatagacgtaaggagagggagtatctgaaagagagtgaaggctacaaggacagatcgcag
aaagacaaggaaagaaaagaaagacacatggacaaagagcattcaggacaaaaggaagaa
agagaatacagggagcaacatagaaaagaaaaggaggagaaagaaaggagacacaaagag
agagcacaacacaatacaggtgaaagtcggagacatgatggtgaatccagagaagtggag
agtgagcgagtgcacagggaacgaaagggatcggacagagagagggagggaaagagggat
aaacatagagagaggaggcacagagaagaagcaattcctgagagggatcccacagaacgg
aacagcgccaagaaatcatcatcatcctcagacctcagagttcacaaggataagacagag
cctgttaaaactaaggaagtagtgatgcgatctgagtcagcgtggaggtctagtcagaaa
caattaagtgacacagaggagcccgtggaaatcgcggaggccccagctgaggaccgtggc
tatgatgaagctcaggactatgaagaggactttgagaaaatggattatgaggaggatttt
gaggatgtggatgacagcgagggagaggatgaaaagcagacacgcagccatgaagagaga
gaagcgagggaggaaattagttcacagaggagggaggagatcgaggccattcagagagcc
atggatgaggagaacgagagagtgggctctgcccagcccaggctaagcacagaggaggac
gacagacccaaaaggtcaagagattctgaaacgcctcaaagtaaagtttcacagcacggg
aggttcatggactttgtcgctgcgaagcatcgtgaggtcagcaaaaaggttgccagcaaa
cagaagaaacgcagtacagagctgcttcgcctgatcgacctggactactccatcaccttc
tccctcctggatctgccccctgtcaatgaatatgacatgtacatcaaaaactttggaaca
acaaacacaaaacaggcttacgtccagtgcaacgaggacaatactgatcgcgacattcaa
acggaggagatcgagatgagcgagaagtggacacagcatcctgcggagaggaacgtaggc
tgtggaggtcctaaactttcccacgaggcgtctgatgaatctgtgaccaaactgagcatc
gattcacagcgcctagcaacatttctgcgctcagcttcacaggtggttgcggtactgttg
gaagaggatagggctgagaagcaatcactgaagaagctgagaactcaagcagacactctc
tctttcagcgacgggtgtttacagctcaataccaagcttccatttctatatggtcgtcag
atcagcctggttcaattctcccaggtgcagaggcagaccatgctctctgtgcacaacccc
tcagccaagcccagcgctgtgcggctcgacagcaagaccatcatctgtatctggaacatc
tgggagccctcccgcccacagaagattcttgtctacgagtccgaggtgcaatgctgctgc
ttcagccccggtaaagccacgctggtgtttgcgggcacgtccgtgggttctgtagtcttg
tgggacttgagggagcacgccagtgcccattacactttaagaataggggagaacgactgg
actctccgccacccaaccttctccacagatgccgtgctggcagcgtcgggccacatgtcc
tcagtgagctctgtggaggccgtccttgccaccgtggctgagggcctgaggccagagctt
ccccttttggcttctgacgaagagtcatcaggattgtcattccagttggcttctcttgat
ggaaatggggttctgaatctatgggtggtactggagctccctaaagccaacgacgccggc
tcgcacacagacctggggctccggcctgggggcaaagtaaaactgctccacagctccaca
gtcatcaccaccagcgagaggtcttcggcgcgagacgctaagaaaacaacactgttacag
acactgctgttaaaatttctgccttctgattccaaccattttttcattggcacaaatatg
ggtcttgtgaaccatgggaccagtcacgggttaaaggctcctccaaagttctacaggcct
caggtggttggattcagacccgttgatgtcacctccatcgacttttctcccttcggagaa
cccatattcctggtgggctgtggggatggcagtgtcagactacacacagtgctgagtgag
cagcctctgatggagtggaccagcagtacagcagggcagccggtgttgtcagtacagtgg
gcccagaccaggccaacagtcttctgtgttctggatgctgcctcctaccttcacatatgg
gacctgctggagaaagactttgagcctgtgatcaccgaaaaaattgatgctgacagggta
acagccatggctgtttttggtgaccctgcaaagcagaacacctattcaggaatatcactg
gcaacacagtcggggaagatagaaatgcagtatttcagcaagagattgacagtgcctgaa
tctgctgacctggagaaactacagatcatgatgcaggaggccttttga
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integrated database retrieval system
