Oncorhynchus tshawytscha (Chinook salmon): 112228027
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Entry
112228027 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF152
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112228027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112228027
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112228027
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112228027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112228027
NCBI-ProteinID:
XP_024248915
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All DBs
Position
LG29:complement(6433068..6539729)
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AA seq
213 aa
AA seq
DB search
METLSLSQDSILECQICFNYYSPRRRPKLLDCRHTCCSVCLTQMRSSQKEIRCPWCRGVT
KLPAGFSVSQLPDDPDIITVIAIPHASEHTPVFIRLPSNGCYMLPLPVAKDRPLLPGELG
CRFLPGGSGQQKVDVAVVAMPELQPLGLGMSLEGLEETERRGVGGGGGGGGKGSTWSGVC
TVILVACVLLFLLGIVLHNMSCISKRFTVISCG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagactctgtctctctcgcaggactccatcttggagtgtcagatctgttttaactac
tacagcccgcggcggaggcccaagctgctggactgcagacacacgtgctgctccgtgtgc
ctgacccagatgaggtccagccagaaagagatccgatgcccctggtgccgcggcgtcacc
aaactccccgccggcttttccgtatcccagctccccgacgaccccgacatcatcaccgtt
attgccattccgcacgcctccgagcacacgccggtctttatccgcctacctagcaacggc
tgctacatgctgcccctgcctgtcgccaaggacaggccactgttacccggtgaactgggc
tgccggttcttgccaggtggcagtgggcagcagaaggtggatgtggcggtggtggctatg
cctgagttgcagcccctgggtctggggatgagtctcgaaggcctggaggagacagagaga
aggggagtcgggggaggtggtggtggaggggggaagggctccacgtggtccggggtgtgt
acagtaatcctggtagcctgcgtcctgctctttctcctgggaatcgtgctccacaacatg
tcctgtatctctaaacgctttactgtcatctcctgcggctga
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