Oncorhynchus tshawytscha (Chinook salmon): 112228037
Help
Entry
112228037 CDS
T05605
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228037
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112228037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
Zn_SUZ12
zf-C2H2_6
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
112228037
NCBI-ProteinID:
XP_042164515
UniProt:
A0AAZ3SB47
LinkDB
All DBs
Position
LG29:complement(2765615..2858650)
Genome browser
AA seq
1167 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIAEEDGSLADGADCDSNVH
SEDHNVDRWDEVREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCARGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPTSHSSTTRTQTRDKPLQEQ
LPLNQIKSEPMDYEYKPMVVSPAAGATGVNGGAAAPLQGAVQAVMLPTMGLVSPISINLA
DLQNVLKVAVDSNMIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQDGNATKIII
NYSLDPSQTQTQLTAHNLKKEPPTLATTPGQAQAATEPSSKTQQKLPEDLTVSRPPRSKE
EKMEEETTKTCLLCNECPNGLDALHTLKHCKKASGLRINGDKSKSAIDSLLSEGFGDQPK
NLLSLLKAYFALNVEPTKEELSKISDSVSLPADVVKKWFDKMQSGQVSLGAPTPPSEEEG
PLSECHGAIVVSPKVRSEQNTESPTLMQSSPAEATPAEVNGSGPCPASPTPLNLTTGGAV
PAKPSSSDSTEVPLDLSLPKPLREETAATAASYQATVYSHQDEPLNLTKTCTTKKELPLS
AGHHMTSQTLSFYTAGPQSANPISIMTTQLPSGTIYAITDQGSTGVPCLRALTTNNNQTI
LIPQLAYTYTTTATASSPAGTETQEKTTLQINSIKEERQDTSSEVVYTMEEQNDSDTTPS
RNKMRKTESGLYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLIEHMR
LHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQGGGQGGVGEEVLEIESPVGLG
LGGEQPEQSDSRPTSSPPSHLDSDEQGSSTREEEEESDEEDMETVAGEAVEGDPDSILDM
DDIQVVRIGDEGGEEEEEEEREEEGEDTGQEGGENAEGEEQGVKRIVVGGEEEEGEEEEE
EGLVGVEVKEEQEEKEVTGEKAHTRQEEVKENREKEVEEEQSEQAQEEVKEETMDTEEAV
TSEEKEESGEVMKENEGETNGNTVSDD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaatgtagtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcgcggaggaggatgggagtctggcagacggggctgactgtgacagcaacgtacac
agtgaagatcacaacgtagaccgctgggatgaagtgagggaggagtgtggttctgatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatctacccagaagcccctgaggacgagccccgccaggggacgcccgaggccagcgga
catgacgagaatggcactccggatgcgttctcacagctcctcacctgtccctactgtgcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccgaaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcatcacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgt
ttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgacccctgcctgccaaggcctcccaatgcccatccccagccatg
cccacctcgcactcctccaccacacgcacccagacccgagacaaacccttgcaggaacag
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatggtagtg
tctccagcagcgggggcaacaggagtgaacgggggtgcggctgccccactgcagggcgcg
gtgcaggcggtgatgctccccaccatgggcctggtctctccgatcagcatcaacctggca
gacctacagaatgtcttgaaggtggcggtggacagtaacatgatcagacagatgttggag
aacaatgctaagtcagcggggactggcatgggggcgacaggtgttcctcaccagcagctc
atctcagctatcagtctgcccattatgggtcaggacggcaacgccaccaagatcatcatc
aactacagcctggaccccagccagacacagacccagctcactgcccataacctgaaaaag
gagcccccgaccctggctacaacaccaggccaggcccaggctgccacagagccttccagc
aagacccagcagaaactcccagaggacctgacagttagcaggccccccaggagcaaagag
gagaagatggaagaggagactactaagacctgcctgctttgtaatgagtgccccaatggt
ctggacgctctccacacactcaagcactgtaagaaagcctcaggcctcaggatcaatggg
gacaaatcaaagtctgccatcgattcattattgtctgaggggttcggggaccagcccaag
aaccttctgtccctcctcaaggcctacttcgccttaaatgttgagcccaccaaggaggag
ctcagcaagatctccgactcggtcagcctgcctgccgacgtagtcaagaagtggtttgac
aagatgcagagtggtcaggtctcactaggggccccgacccctccgtctgaggaagaaggg
cccttgtctgagtgtcatggggccattgttgtgtcccctaaagtaagatcagagcagaac
acagagagccccaccttgatgcagtctagcccagctgaggccactccggctgaggttaac
ggctctgggccctgcccggcctcccctacaccactaaacctgaccaccgggggggccgtc
ccagccaaaccctcctcttcagacagcacggaggtccccctggacctgtcgctaccaaag
cccctccgagaggagaccgctgccaccgcagcctcttaccaagccactgtttactcccat
caggacgaacccctgaacttgacgaagacttgcacaaccaagaaagaacttccgctctct
gcaggccaccacatgactagccaaaccttgtccttttacaccgccggcccacaaagtgcc
aaccccatcagcatcatgaccactcagctgcccagcgggaccatctatgccatcactgat
cagggcagcacgggtgtgccctgcctccgggcgctcaccaccaataacaaccagactatc
ctcatcccacagttggcctacacctataccactacagctacagccagcagccctgcaggg
acagagacacaggagaagaccacactgcagatcaacagcatcaaggaggagcgtcaggac
acaagctcagaggtcgtgtataccatggaggagcagaatgactcagacaccaccccttcc
aggaataagatgaggaagacggagagtgggttgtacgcctgcgacctgtgtgacaagatc
ttccagaagagcagctctctgctccgacataaatacgaacacacaggcaagagaccccac
gagtgtggcatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgt
ctccactccggagagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcactca
ggctcttactcccagcacatgaaccaccgctactcctattgcaagaaggaggcgcaggga
ggaggtcagggaggtgtaggggaggaagtgctggagattgagagccccgtggggttgggc
ctgggaggggagcagccggagcagtcagacagcaggcccacctcctcccctccctcccac
ctggactcggacgagcaagggagcagcaccagagaggaggaagaggagagtgatgaggag
gacatggagacagtggcaggggaggcggtggagggagatccggacagcattctggatatg
gatgatatacaagtggtacggataggagatgagggaggggaagaggaggaggaggaggag
agagaggaggagggggaagacactggtcaggaggggggagagaatgcagaaggggaagag
caaggagtgaagagaatagtggtagggggtgaagaggaggaaggagaagaagaggaagag
gaggggttagtgggggttgaagtaaaggaagagcaggaagaaaaggaggttacaggggaa
aaggcacatacaaggcaagaggaggtgaaggagaaccgtgagaaggaagtggaggaggag
cagtcagagcaggctcaggaggaggtgaaggaggagacaatggacacagaggaagcagtg
acctcagaggagaaagaagaatcaggggaggtcatgaaagagaatgaaggtgaaacaaac
gggaacactgtttcagatgactag
DBGET
integrated database retrieval system
