Oncorhynchus tshawytscha (Chinook salmon): 112228093
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Entry
112228093 CDS
T05605
Name
(RefSeq) POU domain, class 4, transcription factor 3
KO
K09366
POU domain transcription factor, class 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228093
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112228093
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
Motif
Other DBs
NCBI-GeneID:
112228093
NCBI-ProteinID:
XP_024248984
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Position
LG30:41135714..41137987
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AA seq
338 aa
AA seq
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MMTMNGKQHFSMHPVLQEPKYSGLHASSEGMRRVCLPAPQLQGNIFGGFDESLLARAEAL
AAADIVSHGKSHHFKPDVTYHTMSSVPCTSNSSTVPISHPSTLTSHQHHHHHHLNQNLEG
DLLDHISSSLSVSGMGAPDSSMITTHQHHLQTMGHLHQAMAMGHPHSLSVHNGMSCVNDV
ESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNN
MIALKPVLQAWLEEAEAAYREKNSKPDLFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPS
SEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatgaacggaaagcagcatttctctatgcaccctgtgctgcaggagcccaaa
tactctggcctgcacgcgagttcggaaggcatgcgcagagtttgtctgcctgccccgcag
ctccagggcaatatcttcggtggctttgatgagagtctactggcacgcgcggaagctctg
gcggctgctgacatagtctctcacggcaagagtcaccatttcaagccagacgtgacttac
cataccatgagtagtgtcccctgcacctccaactcctctacggtgcccatctcccatcct
tccaccctgacctctcaccaacaccaccaccaccaccacctcaaccagaatttagagggg
gatcttctggatcacatctcgtccagtctctcagtgagcgggatgggggctccggattcc
tctatgattaccacgcaccagcaccacctccagaccatgggtcatctccaccaggctatg
gccatgggtcatccgcactctctatctgtgcacaacggaatgtcgtgtgtcaacgacgtg
gagtcagatcctagggagctggaagcctttgctgagcgattcaaacaaaggaggataaag
ctcggggtgacccaggcggacgttggctcagccctcgccaacctgaagataccaggggtg
ggctctctcagccagagtactatctgcaggtttgagtccctcaccctctctcacaataat
atgattgcgctaaaacctgtcctccaagcctggctcgaggaggccgaggctgcttaccgg
gagaaaaacagcaagccagatctttttaatggtaacgaaaggaaacgaaaacgcacttcg
atagccgcacctgagaagcgctcgttggaggcatattttgcgatccagccccgtccatct
tcggaaaaaattgctgcaattgctgaaaagctggaccttaaaaaaaacgtggttcgtgtg
tggttttgcaaccaaaggcaaaaacagaaaaggatgaaatattctgctgtgcattag
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