Oncorhynchus tshawytscha (Chinook salmon): 112228158
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Entry
112228158 CDS
T05605
Name
(RefSeq) claudin-like protein ZF-A89
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112228158
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112228158
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112228158
04147 Exosome [BR:
otw04147
]
112228158
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112228158
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112228158
Exosomal proteins of colorectal cancer cells
112228158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
DUF4064
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
112228158
NCBI-ProteinID:
XP_024249050
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All DBs
Position
LG30:1746329..1754529
Genome browser
AA seq
368 aa
AA seq
DB search
MVSAGLQMLGTALGIIGWIGTIIVCAMPMWRVTAFIGSNIVTSQTSWEGIWMSCVVQSTG
QMQCKVYDSMLALSSDLQAARALTIIAILAGIIAILLAVAGGKCTNCVDNEASKAKVGVA
SGVVFIIAGVLCLIPVCWTAHSIIQDFYNPLLVSAQKREEKVMSSAGLQILGIFLAIIGW
LGDIVICALPMWKVTAFIGNNIMTAQTFWEGLWMNCVQQSTGQMQCKVYDSLLALPPYLQ
AARALVIISILVAVIGILLSVAGGKCTNCIEDEEAKSKVAITSGVFFLVAGVLCLIPVSW
CANTVIRDFYNPLLTDVQRRELGASLFIGWASAGLMLVGGALLCCQCPLREARGYSAKYS
APNGGAYI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggctgggctacagatgctgggcactgcccttgggatcataggctggattggg
accatcattgtttgtgccatgcccatgtggagggtcaccgccttcatcggcagtaacata
gtcacctcgcagacctcctgggagggtatctggatgagctgcgtggtccagagcacgggc
cagatgcagtgtaaggtctacgactccatgctggccttgagttctgacctacaggccgcc
agagctctgaccatcattgccatcctcgccggcattattgccattctgctggccgtagcc
gggggcaagtgcactaactgtgtggataacgaggcgtccaaggctaaagtgggtgtggca
tccggggtggtgttcatcattgccggagttctgtgcctgatccctgtctgctggacggcc
cacagcatcatccaggacttctacaacccgctcctggtaagcgctcagaagagggaagag
aaagttatgtcctccgctggtctccagattctgggcatcttcctggctattattggttgg
ctaggggacattgtcatctgcgcgctccccatgtggaaggtgacggctttcataggcaac
aacatcatgactgcacagaccttctgggaaggcctgtggatgaactgcgtgcagcagagc
acaggccagatgcagtgtaaggtttacgactccttgctagctctccccccatacctccag
gctgccagagctctggtgatcatctccatccttgtggccgtgatcggcatcctactctcc
gtggccggggggaagtgtaccaactgcattgaggacgaggaggccaagtctaaggtggcc
atcacatccggcgtgttcttcctagtcgctggcgtcctctgcctgatccccgtgtcctgg
tgcgccaacactgttatcagggacttctacaacccgctgctcactgatgtgcagaggaga
gagctgggagcttcactgttcatcggctgggcctctgctggcctaatgctcgtcgggggt
gcgcttctctgctgccagtgccctctgcgcgaagcaagggggtactctgccaaatattcc
gcccccaatggaggggcctacatctga
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