Oncorhynchus tshawytscha (Chinook salmon): 112228183
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Entry
112228183 CDS
T05605
Name
(RefSeq) proto-oncogene DBL isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228183
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112228183
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
CRAL_TRIO_2
Spectrin
Motif
Other DBs
NCBI-GeneID:
112228183
NCBI-ProteinID:
XP_042165520
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All DBs
Position
LG30:complement(4969486..4982980)
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AA seq
1051 aa
AA seq
DB search
MAEANPFRGLPRLRRAAMSFPGNLHLVLVLRPTSLLQSPSGTGTDLGFRFSQDDFMLKMP
VVMLSSVTDLLRYIDENQLTSEFGGTLEYCHSDWVVLRTAIESFAVTVKEIAQLLQSFGT
ELAETELPDEADAIEFLLRSHTDKYRQLKDDIRSVMREGRHLLSNLEAAKAAKADGQEDK
DIKQDWDTVQRLLAQLRDMEMAFDGFFEKHHLKLQQYLQLMRYEMSFHEMEEILDQLSGQ
EKEVAAVGGTVVQTEQLLKDLESLDTRAQEEMGRAQIIILRGHQLATGHHYALALIVQRC
NELRHHCDVLTTAIRAKRATLTRIHHLLLRLEEARRWCDEGAYLLANQLVDKFQSKEGAQ
GALQDIERLQEETPLCLSQSPDVLSLEFEAILTPQLESQIGVATEKLSAMQRMIHNRQAC
LRKLADIQVRPIQLVAPRPEHSPRCKSPLFSPKHSVDFNSVLNSRFSFDLLPGKRAARKS
PRKIEVMHDYEENRNSLSYGQEGEESPDQLKRHIIKELIETERIYVEELLSVLLGYRAEM
DNPALSNLLPSALRSKKEVLFGNMPEIYKFHSRTFLQDLEGCLETPERVGACFLRRKEKF
QVYERYCQNKPHSELLWRQCSASLFFQECQKKLEHKLGLDSYLLKPVQRLTKYQLLLKEL
LKHSADSDYISELQGALESMLDLLKSVNDSMHQIAITGYEGELSDLGRVLMQGSFSVWIS
HKRGPTRMKARFKPMQRHLFLHEHALLFCKRREEHGEGHDRTPFYSFKHCLRMSAVGITE
NVKGDVKKFELWYSGREEVYVVQAPTFQIKITWLTEIRKILTNQQRLLQGFYFASTCLSA
SMLEDIPPIQLSEQTPLSPPSTDSLAHMSVCMPWSPRQITGCSGCFDVLPHSKPPDQSLS
TEEAESSGRTSPVLTDPVVFSPQPQHNNRRSWPGTSHSVDICEGPEDWSTTDLSNLSDSD
EEDDPTPLVPGRYRALVESSVCSTDDLIIKCGDVIQLLDQDTVGKWLVRNVSRCDEGRVS
ADNLHRILGESGRAHSGRMEGNQKTRKLSSL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccaatccttttaggggactgccccgtttgcggagggccgcgatgtccttc
ccggggaatctccacctggtgttggttctgcggcccaccagcctcctgcagagtccctca
ggcaccggcactgacttgggcttccgcttcagccaggatgacttcatgctcaagatgccg
gtggttatgctcagttcggttacggacctgcttcgctacatcgatgagaaccagctgacc
tcagagtttggtggaactctggagtactgccatagtgactgggttgtccttcgtacggct
attgagagctttgccgtgactgtcaaggagatagcccagttgctgcagtcgttcggcacc
gagctcgccgagaccgagcttccagatgaggccgacgccatcgagttcctcctcagatcc
cacactgacaaatacaggcagctgaaagatgacatcaggtcagtgatgcgggagggccgt
cacttgctctccaacttggaagccgccaaggcagctaaagctgatggccaggaggacaaa
gatatcaaacaggactgggacacggtgcagaggcttctggcccaactacgggacatggag
atggcttttgatggcttttttgagaagcatcacctgaaactgcagcagtaccttcagctg
atgagatatgagatgagctttcatgagatggaggagatcctggaccagctgtctggtcag
gagaaggaggtcgctgccgtgggcgggactgtggtccagacagaacagctattaaaagat
ctggagtcactggacacccgcgcacaggaagagatgggccgcgcccagatcatcatcctg
cgcggccaccagctggccaccggtcaccactacgctctggccctgatcgtccagcggtgc
aacgagctgcggcaccactgtgacgtgctgaccaccgctatccgagccaaacgggctacc
ctcactcgcatacaccacctgctgctgcgtctggaagaggcccggcgctggtgtgacgag
ggggcttacctcttagccaatcagctggtggataagttccagtccaaggagggagctcag
ggagcgctgcaggatatagagagactccaggaggagacaccgttgtgtctgagccaaagc
cctgatgtcctcagtctggagtttgaggccatcctgacccctcagctagagtctcagatt
ggggtggccactgagaagctgtctgccatgcagagaatgatccacaacagacaggcatgt
ctgaggaagctggctgacattcaggtgcggcccatccagctggtggcccctcggcctgag
cactctccccggtgcaaatcccctctcttctcccccaaacacagtgtagatttcaactcg
gttctcaactcaaggttctcttttgacctcttacctggcaagagggcagctcggaaaagc
cctcgaaagatagaggtgatgcatgactatgaggagaaccgcaactctctctcctacggc
caggagggagaggagagcccagaccagctgaaacgacacataatcaaagagcttattgag
acagagaggatctatgtagaggagctgctctctgtcttgctgggttacagggcagagatg
gataaccccgccctctccaacctactgccctctgccctgcgcagcaagaaggaggtcctc
ttcgggaatatgccagagatctacaaattccatagcaggaccttcctccaggacttggag
gggtgcctggagactcccgagagggttggagcatgctttctacgacggaaagaaaagttc
caggtgtatgagcgttactgtcagaacaagccgcactccgagttgctatggagacagtgc
tctgcttccctcttcttccaggagtgtcagaagaagctggagcacaaactggggttggac
tcgtacctcctaaagcctgtccagagactgactaagtaccagctgctgctgaaggagctg
ttgaagcacagcgcagacagtgattatatatctgagctgcagggggcactagagtccatg
ctggatctcctcaagtctgtcaacgactccatgcaccagatcgccatcacaggttatgag
ggggagctgagtgacctgggccgggtgctaatgcagggctccttcagtgtgtggatcagc
cataagaggggcccgacgaggatgaaggcccgtttcaaacccatgcagaggcacctcttc
ctgcatgagcacgctctgctcttctgcaagcgccgtgaggagcatggggagggccacgac
cgcacccccttctacagcttcaagcactgcctgaggatgagtgctgttggcatcactgag
aatgtcaaaggagacgtgaagaagtttgagctctggtacagtggcagagaggaggtgtac
gttgttcaggccccgacgttccagatcaagatcacctggctcaccgagatcaggaaaatt
ctcaccaaccagcagaggctcctccaaggtttctactttgcgtctacttgtctgtcagct
tccatgttggaagacattccccctattcaactctcagagcagactcctctgtctcctccc
tctactgacagtctggctcatatgtcggtgtgcatgccgtggagtcccaggcagatcact
ggctgctcaggttgttttgatgtccttcctcacagtaagcctccagaccagtccctcagc
acggaggaggccgagtcatcaggccgcaccagccccgtcctcacagaccccgtggtcttc
tcccctcagccccagcacaacaatcgacgcagttggcctggcacttcccactcagtggac
atctgtgagggtccggaggactggagcaccactgacttgtccaacctgtcagactctgac
gaggaggacgaccctactccactggttcctgggaggtacagggccctggtggaaagtagc
gtgtgcagtacagatgacctcatcattaagtgcggcgatgtcatccagctgctggatcag
gacactgtagggaagtggctcgtgaggaatgtcagtcgttgtgatgagggtcgggtctca
gctgataacctgcacaggattctgggagagagtggccgtgcccactcaggcaggatggaa
gggaatcagaaaacccggaagctcagctctctctga
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integrated database retrieval system
