Oncorhynchus tshawytscha (Chinook salmon): 112228193
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Entry
112228193 CDS
T05605
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
otw01006
]
112228193 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228193 (chm)
Prenyltransferases [BR:
otw01006
]
Protein prenylation
Rab geranylgeranyltransferase
112228193 (chm)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112228193 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
112228193 (chm)
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Gene cluster
GFIT
Motif
Pfam:
GDI
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
112228193
NCBI-ProteinID:
XP_042164967
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All DBs
Position
LG30:360011..401975
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AA seq
675 aa
AA seq
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MAADNLPSEFDVIILGTGLSESVIAAACSRVGQRVLHVDRRNYYAGNWASFTFNGLLSWI
EEYKAGQSEEAVREDWKEKLEEGEEALALSAMDTSISNLEVFCYASEEPEEEEVNEAAAA
AWSVPQTPDSEGEVERCLLESSSVEEEEPVVASDEASPASGPDAGAEQTQPEGQEREVPS
QAEETQGEVQQASPSPAERQPEPKKKITYTKIVKEGRRFNIDLVSKLMFSRGSLVDLLIK
SNVSRYAEFKNVTRILTYRNGKVEQVPCSRADVFGSKQLTVVEKRMLMKFLTFCLDFEQH
PEEYQDFSEHSFWDFLQTKKLTENLQHFILHSIAMVIPEVCTVEGLRATQHFLRCLGRYG
NTPFLFPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVLDKESGKCKAVIDTHGQRISC
SHFVVEDGYIGADQRKNTDSRQISRAVLITDRSILPSDSEQQISLVTVPPVEPGGPLVRI
IELCSSTMTCMLDTYLVHLTCSSASGSAQEDLAPVVSRLFHTPASPGEEPAEGEEESRGP
TVLWALYFNMRDTSAVDRSSYDLPSNVHVCASPDTALGSDHSIKLAEAVFRQLLPDEEFC
PPAPNPEDIIYDGDGPQGEGPGFEEAAPAEGAGAQGGESAGRQEGKEAVGEKKGAGDSVT
PETGAGDEPSPTSDE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaacctaccatccgaatttgatgttatcatactcgggacaggcctgtct
gagtctgttattgcagcggcatgctcccgtgttggacagagggtcttgcatgttgacagg
agaaactactatgctggaaactgggccagtttcacattcaatggactgctgtcctggatc
gaggagtacaaagctggccagagtgaggaggctgtacgggaggactggaaggagaagctg
gaggagggagaggaggccctggcgctcagcgcgatggacacgtccatctccaacctggaa
gtgttctgctacgccagtgaggaacctgaggaggaggaggtgaatgaggctgcggctgca
gcctggtccgtccctcaaacaccagactcagagggggaggtagagaggtgtctgctcgag
agcagttctgtggaggaggaagagccagtggtggccagtgatgaggcgtctccagcctct
ggacctgatgctggggcagagcagacccaaccggaggggcaggagagagaggtgcccagc
caggcagaggagactcagggggaggtgcagcaggccagcccctctccagctgagaggcaa
ccagagcccaagaaaaagatcacctataccaagattgttaaggagggacggaggttcaac
attgaccttgtgtctaagcttatgttctctcgtggctcactggtggacctcctcatcaag
tccaacgtcagccgatacgcagagtttaaaaacgtcacccgcatccttacctaccgtaac
gggaaggtggaacaggtgccctgctccagggctgatgtttttggcagcaagcagctgaca
gtggtggagaaaaggatgctgatgaagttcctcaccttttgcctggactttgagcagcac
ccagaggaataccaggacttctcggagcattccttctgggacttcctgcagaccaagaag
ctgacggagaacctgcagcatttcatccttcactccattgccatggtgatcccggaggtg
tgcacggtggaaggcctgagagccacgcagcacttcctgcgttgtctggggcgctacggc
aacacgcctttcctgttccccctctacggcctgggggagattcctcagtgcttctgcagg
atgtgtgctgtctttggaggaatctattgtcttcgccactcagttcagtgtctggttctg
gacaaggagtccggcaagtgcaaagctgtgattgacactcatggtcagagaattagctgc
agtcactttgtggtggaggatggctacatcggggcagaccagaggaagaacacggattcc
aggcagatatccagagcggtcctcatcacagaccggtcaattctgccatccgattctgaa
cagcagatctccctggtcactgtgcctcccgtggagcctggtggtcccctggtccgtatc
atagagctctgctcttccaccatgacctgcatgctagacacctatctggtgcacctgaca
tgttcctctgcctctggctccgcccaagaagacctagctcctgtggtgtccaggctcttc
cacacaccagctagtcctggagaggaacctgcagaaggagaggaggagagcaggggaccg
acggtgctgtgggccctgtacttcaacatgagggacacctctgctgtggacaggagcagc
tatgacctgcccagtaacgtacatgtgtgtgccagccctgataccgccctgggcagtgac
cactccatcaaactggccgaggcagtgttccgccagcttctccctgacgaggagttctgc
cccccggcccccaaccccgaggacatcatctacgatggggatgggccccagggggagggc
ccgggctttgaggaggctgcaccagcagagggtgctggtgcccaaggaggagagagcgct
gggaggcaggagggaaaggaagccgtgggagaaaagaagggggcgggagactccgtaaca
ccggaaactggggctggggatgagccgagccccaccagcgatgaatag
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