Oncorhynchus tshawytscha (Chinook salmon): 112228259
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Entry
112228259 CDS
T05605
Name
(RefSeq) ankyrin repeat and KH domain-containing protein 1-like isoform X1
KO
K16726
ankyrin repeat domain-containing protein 17
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112228259
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
112228259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
112228259
NCBI-ProteinID:
XP_042165749
LinkDB
All DBs
Position
LG30:43483488..43530263
Genome browser
AA seq
2620 aa
AA seq
DB search
MQDAVAGTAMLTDGFEDEIDSVTPRSPAVGMGVGATPGAGLGGLGIGVGGKKVRLFGEAG
GPAADRLDFQLAAAAVLSSGPGSASDDDEVSEVESFILDQEDLDNPMLKTASELLLSSAA
DGADLRTVDPETQARLEALLEAAGIGKLSTTDGKAFADPEVLRRLTSSVSCALDEAAAAL
TRMRAENTLNASQADNLVIFSRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLA
CSAGYYELAQVLLAMHANVEDRGIKGDITALMASASGGYVDIVKLLLVHGADVNAQSSTG
NTALTYACAGGFLDVVKVLLKEGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGIN
THSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLL
DSEAQVNMPADSFESPLTLAACGGHVELAALLMERGANLEEVNDEGYTPLMEAAREGHEE
MVALLLAQGANINAQTEETQETALTLACCGGFLEVADFLIKAGADIELGCSTPLMEAAQE
GHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQTGADLEHESEGGRTPL
MKAVRAGHLCTVQFLISKGANVNRATVNNDHTVVSLACAGGHLAVVELLLSHGADPTHRL
KDGSTMLIEAAKGGHTIVVSYLLDYPNNVLSVPVPDLSQLTPPSHDTSPAPRVPFQALAM
VVPPQEPDRVPSNITTPPPVITKGGSKQRLSPLQGSPVAAGGPDADLLPPFHPYQPLECI
VEETEGKLNELGQRISAIEKAQLQSLELIQGEPLTKDKIEELKKSREEQVQKKKKILKEL
QKVERQLQLKTQQQFTKEYMEAKGLKDDPGQLGQAAGVEQPGTPLPLQAAEPGSDTEGDG
EGIHHHHDGQPHPAAEEEDDEEEEEEDYAKLPQVDTILYRQAQEPPPPAPPHTEALPCPA
PPHTEALPCPAPPHTQALPCPAPPHTQALPCPAPPLLQARFLPSHLLATQQSTDFSTADY
PVSSSPDLERVMVNQQQMLWQQLTDLGPGLLTQAPEGLMVATPAQTLTDTLDDIMAAAVS
SRVPMLSTTASPPAQTPIHSVSPHSMLPLYPSVDIDAHTESNHDTALTLACAGGHEELVS
VLVARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSG
GRQEVVELLLLRGANKEHRNISDYTPLSLAASGGFVNIIKILLNAGAEINSRTGSKLGIS
PLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEH
RAKTGLTPLMEAASGGYAEVGRVLLDKSADVNAPPVPSSRDTALTIAADKGHYKFCELLI
NRGAHIDVRNKKGNTPLWLAANGGHFDVVQLLVQAGTDVDAADNRKITPLMAAFRKGHVK
VVQYLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCMETIVKAKDQQAAEANKNASILL
KELDLEKSREESKKQALAAKREKRKEKRKKKKEDQKRKLEGEEEEEEEEEEAKVKEELED
QDSSEDGDVPIDPPSATTTTTIGISATFTNAFAKKRANVATTSSTNRKNKKNKTMEPIIL
QDPQGVLAQQKTDKNKIHGEPRGGGVPGGSDSDNLDSTDCNSESSSGGKSQELNYLPDMP
SSSSSSSSSSSAPSGVSQQPQPVPEKRHSSRDHKVTVCISKPHQKLHDCINVLAPSSLPP
SFKTISVPVTSPNSKMNLTSPKRGQKREDGWKEVVRRSKKLLVPASVVSRIMGRGGCNIT
AIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRHAVQLINALIQDPAKELEDLIPRNHI
RTPGTSTKMGSTYTTSTGATNTMAAGSKGLASVFPSSAVSFQTPSVSQQGGKMGKNLSAG
VRPPFVSLPLAYANPHLALLAAQTMHHIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPG
STHSSPKHNGSTAPRPSPVSAAHPEYTAPASTAAPAATVSPTSTAPSGTPTPSSARKQLF
SGEPKTTGMTAVTSTVSNVPATQLAPAPSTMSSTPSSPSVPIATSAQQLPVSKPEPAGGT
TPGKEKSSPDAAPVQGGVSEGSSSNGPMYFTGPPTAPPSLPSQQPDSRQQQLPLPFSPST
EPSPQAAQPPCSHLPSSHAAPAGGSTVPHYAQPSPSCVQPSAQVYPMTAGTSPQEHHSVF
VSSGASQEQHQKQPQQYTNQGMAAPSMGMMNGSQMHSHGGKTQQLPPNYGPNALFNHFSS
MFDSNQVGNNQVWGACHLPARTPPEQPYMGGMGQMEKVMPAPDGSKAPGYRCNSQRIVTS
PIGMHHMDPSGNSISSSAALTSFATSISGSAVYLQGPSPVGTPSFSRQHFSPHPWSASTS
SESPVSSVSSPLCASTVTTALIQAKPSSNSQQDRKVPPPIGTERLARIRQTGSVNHAMLT
AGYTPPVGQGGIWSFGVGSASVLPCSYPPPLEAMSGWSQPLMGGHVIQQPSGFSQHQAME
RDDTGIVNPSNTFHQPMPTNFMDFPKGLPMSMYGGTIIPPHPPMGEAPGGPMYNGLHSAD
PAWNPIMNVVSNSAETAETQQVWPGTWAPHVGNVHLNHVN
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgcagtagccgggacggcaatgctgacggacggcttcgaggacgagattgac
tctgtgactccgcgctcccctgccgtaggaatgggggttggagccacaccaggagccgga
ctcgggggtttagggattggtgttggtggaaagaaagtccgcttgtttggcgaggctggt
gggcctgcagctgaccggcttgatttccagctcgcagcggccgcagtgctttcctccggc
cctggatctgccagcgacgatgatgaggtatctgaggtggagtccttcatattagaccag
gaagacctggacaaccccatgctaaagacagcgtcagagctgctcctgtccagcgctgca
gacggagctgatctcagaacagtggacccggaaacccaagccagattggaggctctgttg
gaagcagccggtattggtaaactgtccaccaccgatggaaaagccttcgcagatccagag
gtgctacgtcgcttgacgtcgtccgtgagctgtgcgctggacgaggccgccgccgctctc
acacgcatgagggccgaaaacacactcaacgccagccaggcagacaatctggttattttc
agccgtagcttggcggaggcgtgctccgacggggacgtcaacgctgtgaggaagctgctg
gatgaggggaggagcgtcaacgaacacaccgaggagggagagagtctgctctgcctagcc
tgctctgctggttactatgaacttgcacaggtcttgctggccatgcacgctaacgtggaa
gatcggggcatcaagggtgacatcacggccctcatggcctcagccagtggcggctacgta
gacatcgtcaaactgctgctggtacatggggctgacgtcaacgcacagtcctccacaggt
aacacggcgctgacgtacgcgtgtgcgggcggctttctggacgtggtgaaggtgctgctg
aaggaaggcgccaacattgaggaccacaacgagaacggccacacacccctgatggaggcg
gcgagcgcgggtcacgtggaggtcgcccgggtgctcctggagtacggggctggtatcaac
acgcactccaacgagttcaaggaaagtgcacttacgctggcctgctacaaagggcacctg
gacatggtgcgcttcctgttagaggcaggggctgaccaggagcacaagaccgacgagatg
cacacagcactcatggaggcttgtatggatgggcatgtggaggtggcgcggttgctgttg
gacagcgaggcgcaggtcaacatgcccgccgactctttcgagtctccgctgacgctggcg
gcctgtgggggccacgtagagcttgctgccctgctgatggagaggggcgccaacctggag
gaggttaatgatgagggatacactcccctcatggaagctgcacgagagggccacgaggag
atggtggcgctgcttttggcacaaggtgccaacatcaacgctcagacggaggagacccag
gagacagccctgacgctggcctgctgcgggggcttcctggaggtggccgacttcctcatc
aaggctggggccgacatcgagctgggctgctccacgcctctcatggaggctgcacaggag
ggacacctggagctggtcaagtacctgctggccgccggagccaatgtccacgccaccacg
gcgacgggggacacagcgctgacctacgcctgtgagaacggacacacagacgtggctgac
gtgctgctgcagactggggctgacctggagcatgaatcggaggggggcaggacccctcta
atgaaagctgttagagcgggccacctctgtactgtacagttcctaatcagcaaaggagct
aatgtgaacagggcgacggtcaacaatgatcacacagtagtgtctctagcctgcgccggg
ggccacctggccgtggtggagctgctgctgtctcatggggctgatcctacacacagactg
aaggatggctccaccatgctgatcgaagctgctaagggcggtcacaccatcgtggtgtcc
tatctcctcgactaccccaacaacgtcctgtcggtccccgtgccagacttgtctcagctc
acacccccatcccatgacacttctccggctccacgagttccattccaagccctggccatg
gtggtgcctcctcaagagccagacagagtgccctccaacatcacaacgcctccacccgtc
atcacaaaaggcggatccaagcagaggctgagccccctacagggcagccccgtcgccgca
ggcggtccggacgcggacctgctgcctcctttccacccgtaccagcccctagagtgcatc
gtggaagagactgagggcaagctgaacgagcttggccagaggatctccgctatagagaag
gcccagctgcagtccttggagctcatccagggagagcctctcaccaaagacaagatcgag
gagctgaagaagagccgcgaggagcaggtccagaagaagaagaagatcctcaaggagctg
cagaaggtggaacgccagctgcagttgaagacacagcagcagttcaccaaagagtacatg
gaggccaaaggcctgaaggacgacccggggcagcttggccaggcggcaggggtggagcag
cccggcacccccctgcccttgcaggctgcagagccgggctccgacaccgagggggacggg
gagggcatccaccaccaccatgatggacagccccaccctgccgccgaggaagaggacgat
gaggaggaggaggaggaggactacgccaagctacctcaggtggacaccatcctgtataga
caggcccaggaacccccgccacccgctcctcctcacaccgaggccctgccgtgtcccgct
cctcctcacaccgaggccctgccgtgtcccgctcctcctcacacccaggccctgccgtgt
cccgctcctcctcacacccaggccctgccgtgtcccgctccacccctcctgcaggcccgt
ttcttaccctcccatctcctggccacccagcagtccacagacttcagtacggcggactac
cctgtcagctccagccccgatctggagagggtgatggtgaaccagcagcagatgttgtgg
cagcagttgacagacctgggaccgggccttctcacccaggcccctgaaggactcatggtg
gccaccccagcacagaccctcacagatactttggacgacatcatggcagcagcggtgagc
agcagagtccccatgttgagcacgacggcctcgcccccagcacagacgcccatccattca
gtgtccccacactctatgctccccctctacccctccgtagacatcgacgcacacacggag
agtaatcacgacaccgctctgacgctggcctgtgccggcggtcacgaggagctggtgtcg
gtgctcgtcgcccgcggggctaacatcgagcatcgggataagaaaggtttcactcctctg
atcctggctgctacagcgggtcatgttggcgtggtggagatcctgctggataaaggaggg
gacatcgaagcccagtctgagagaaccaaagacactcctctctccctggcatgctctgga
ggaagacaggaggtggtggagctgttgctgctgcgcggggccaacaaggagcaccgtaac
atttcagactacactccgctcagcctggccgcctcggggggcttcgtcaacatcatcaag
atcctcctcaacgctggagctgaaatcaactccaggactgggagtaagctgggtatctct
cctctgatgctggctgccatgaacggtcacgtccctgcggtcaagctgctgctggacatg
ggctcagacatcaacgctcagatcgagactaaccgcaacacggcgctgaccctggcctgc
ttccagggacgggcggaggtggtcagtctgctgctggaccgcaaggccaacgtggagcac
cgcgccaagactgggctgacccccctcatggaggcggcatcgggtggctatgctgaggta
gggcgggtgctgctggataagagcgctgacgtcaacgccccacccgtcccctcctcccga
gacaccgcgctcaccatcgctgcagacaagggccactacaagttctgtgagctcctaatc
aaccgaggtgctcacattgacgtgcgcaataagaagggaaacactcccctgtggttggcg
gccaacggcggccattttgacgtggtgcagctgctggtgcaggctgggaccgatgtcgac
gcagcagacaaccgcaagatcacaccactcatggctgccttccgcaagggccatgtgaag
gtggttcagtacctggtcaaggaggtcaaccagttcccctcggacatcgagtgcatgaga
tacattgccaccatcacggacaaggacctgctgaagaaatgtcaccagtgcatggagacc
attgtcaaagccaaagaccagcaggcagcagaggccaacaagaacgccagcattctgctg
aaggagctggacttggagaagtccagggaagagagtaagaagcaagccctggccgctaag
cgtgagaagcgtaaggaaaaacgcaagaagaagaaggaagatcagaagaggaagctggag
ggggaggaagaggaggaggaggaggaagaggaggccaaagtaaaagaggagttagaggac
caagactcctctgaagacggtgatgtccccattgacccgcccagcgctaccaccaccact
accatcggcatctctgccaccttcaccaacgccttcgccaagaaacgagccaatgtggcg
accacgtccagcaccaaccgcaagaacaagaagaacaagaccatggagcccatcatcctg
caggacccccagggggtgctggctcagcagaagactgacaaaaacaagatccacggggag
cccaggggcggcggggtgcctggtggcagcgactcggacaacctggacagcaccgactgc
aacagtgagagcagcagtggaggcaagagccaagagctcaactacctaccggacatgccc
tcttcatcttcctcatcctcgtcttcatcgtctgctccctcgggggtgagccaacagccc
cagccggtccctgagaagaggcacagctcccgagaccacaaggtcacagtgtgcatctcc
aaaccacaccagaaactccatgactgcatcaacgtcctggcgcccagctcccttcccccc
tccttcaaaaccatttcagtgccggtcacctcgcccaacagcaagatgaacctcaccagc
cccaagaggggccagaagagggaagacggctggaaagaggtggtacggagatctaagaag
ttattggtgcctgcctctgtcgtgtctcggatcatgggcagaggtggctgtaacatcact
gccattcaggacgtgaccggtgctcacatcgacgtggacaaacagaaggacaagaatgga
gaaaggatgatcaccatcagaggtggtacagagtcgactcggcacgctgtacaactgatc
aacgccctgatccaggacccagccaaggagctggaggacctaatccccagaaaccacatc
cgcactcctggtaccagcaccaagatgggctccacctacaccacctccacaggggccacc
aacactatggcggccggctcaaagggcctggcgtcggtgtttccgtcgtccgctgtgtcc
ttccagaccccctcggtctctcagcagggagggaagatgggaaagaacctgtccgccggg
gtgaggcccccctttgtttcactgcccctggcgtatgccaacccacacctggccctgctg
gctgcccagaccatgcaccacatccgacacccacgtctgcccatggcacagttcggtggc
accttttctccatcgcctaacacctggggcccgttcccggtgcggcccgtcaaccccggc
agcactcacagctctcccaagcacaacgggagcactgccccccggccctcgcctgtctcc
gccgcccatccggagtacacagctcctgcctctacagcagcccctgcagccaccgtctcg
cccaccagcactgccccctccggcaccccaacgccctcctctgccaggaagcagctcttc
tctggcgaaccaaagacgaccggcatgacagcagtcacttccacagtgagcaatgttccc
gccacgcagctggcccctgcaccctccaccatgtcctctactccgtcctccccttccgtg
cccatcgccacgtctgcacagcagctgcctgtctccaagccggagcctgctggtggcacc
acgcctggtaaagagaagtcctctccagatgcagcacctgtccaaggtggagtgtcggaa
ggttccagctccaacggccccatgtacttcacaggtcctcccacggctccaccatcactg
ccatcccagcagccggacagccgacagcagcagctgcccctccccttctcccccagcaca
gagcccagcccccaggccgcccagcctccctgctcccacctgccctcctctcacgctgca
ccagcagggggcagcaccgtacctcactacgcacagccttctccctcatgcgtgcagccc
tcggcccaggtctaccccatgacagctgggacatctccgcaggagcaccattctgtgttt
gtatcctctggagcctcccaggagcaacaccagaaacaaccgcagcagtataccaaccag
ggcatggcagccccttccatgggcatgatgaatggctcccagatgcacagccacgggggc
aagacccagcagctgccccccaactacggccccaacgccctcttcaaccatttcagcagc
atgtttgacagcaatcaggtgggcaacaatcaggtgtggggagcatgtcacctgcctgct
cggacccctccggagcagccctacatgggaggcatgggacagatggagaaggtgatgcca
gctcctgacggctccaaggctccagggtaccgctgcaactcccagaggattgtcaccagt
cccatcggcatgcaccacatggacccgtcaggaaactccatctcttcgtctgctgctctg
accagcttcgccaccagtatctctggcagtgcagtgtacctgcagggtccgtccccggtg
ggaaccccctcctttagccgccagcatttctcccctcacccctggagcgcctccacctcc
agtgagtccccggtgtcctccgtgtcgtcccctctttgtgcgtccacggtgaccacagct
ctgattcaggctaagcccagcagcaacagccagcaggaccgcaaggtgcccccacccatt
ggcactgagcgcctggcacgcatccgccagacgggctccgtgaaccacgccatgctcacc
gccggctacacgccgcctgtgggacagggaggaatctggtccttcggcgtgggcagtgcg
tctgtcctcccctgctcttaccctccacctttagaggcgatgtcaggctggtctcagccc
ctgatgggtggtcacgtgatacagcagccgtctggcttctcccagcaccaagccatggag
agggacgacaccggcatcgtgaacccctccaacaccttccatcaacccatgcccaccaac
ttcatggacttcccaaagggtttgccaatgtcaatgtatggcgggacgatcattcctccc
caccctcctatgggagaggcccctgggggccccatgtacaacgggctccatagcgctgac
cctgcctggaatcccatcatgaatgtggtctccaactctgcagagactgcagagacccag
caggtctggcctgggacttgggccccgcacgttgggaatgtgcacctgaatcacgtcaac
tga
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integrated database retrieval system
