Oncorhynchus tshawytscha (Chinook salmon): 112228289
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Entry
112228289 CDS
T05605
Name
(RefSeq) vesicle transport protein SEC20 isoform X1
KO
K08497
protein transport protein SEC20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112228289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228289
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
112228289
SSDB
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Paralog
GFIT
Motif
Pfam:
Sec20
Motif
Other DBs
NCBI-GeneID:
112228289
NCBI-ProteinID:
XP_024249244
UniProt:
A0AAZ3RMK0
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Position
LG30:complement(41724461..41727038)
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AA seq
229 aa
AA seq
DB search
MASSQDVHVRICGQEIIKYDLEIKALIQDIRECPGPQSVLMDFNSEVKERFNQLRLRIQN
MEQMAKEQDRETEKQAILSETESNRRQMLSNQTAWRKANLACKLSIDNLEKDELLYGGDS
TVRQRKATKEILVQTSGDITESLMSISRMMAQSVSQSEETIGTLATSSRTVLETDEEFKA
MTGTIHLGRKLISKYNRRELTDKLLIFLAVALFLATVLYILKKRLFPFI
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcccaggatgtccacgtccgaatttgtggacaagaaataatcaaatatgat
ctcgaaattaaagctctcattcaggacattagagaatgtccggggccacaaagtgtgttg
atggatttcaactccgaagtaaaagagagattcaatcagctacgactgagaatccagaat
atggagcaaatggccaaggaacaagaccgagaaacagaaaaacaagccatcttgagtgag
acagagagtaatcgtagacagatgctgagtaaccagacagcttggaggaaggcaaacctg
gcatgtaaactgtccattgacaaccttgagaaagatgagctgttgtatggtggagactcc
actgttcgacaacgaaaagcaactaaggagattttggtccagacatccggtgatatcaca
gagagcctgatgagcatcagtcgtatgatggctcagtcggtgtcgcagagcgaggagacc
atcggcactctggctacgtcttcaagaacagtcctggaaactgatgaagagttcaaagcc
atgacaggaaccatacatttgggaaggaaactgatctcaaaatataacagacgagaattg
actgacaaactactcatctttctagcagtggctttgtttttagcaactgtcttgtacatt
ttgaaaaaaaggctgttcccattcatttag
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