Oncorhynchus tshawytscha (Chinook salmon): 112228292
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Entry
112228292 CDS
T05605
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228292 (msx2b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112228292 (msx2b)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Tropomodulin
Motif
Other DBs
NCBI-GeneID:
112228292
NCBI-ProteinID:
XP_024249248
UniProt:
A0A8C8C3P7
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Position
LG30:complement(41381425..41386009)
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AA seq
261 aa
AA seq
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MSAHVSLRDSSSSEEDSRPELERTMDGLKTQVTRHHHPFSVEAIMSSRKIHSEFTSKPDN
VSVVTFSKTQNSPYLCRESYSPPAGIRKHFIPLSPVKSESSEPDDCAPWVMSPRFSAQTR
QVSPTCPLRKHKTNRKPRTPFTTSQLLSLERKFRQKQYLSIAERAEFSSFLTLTETQVKI
WFQNRRAKAKRLQEAELEKLKMAAKPALHPGFTLPMPLGAQLHTAVSLYGQSYPYHRPML
PLSPMGLYATPLGYSMYHLSG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccatgtgagtttgagggatagcagttcatcggaggaggacagccgaccggag
ctagagaggacgatggatggcctcaaaactcaagtgacaagacaccatcatcccttcagt
gtggaggctataatgtcaagtagaaagattcacagtgagtttacaagcaaacccgacaat
gtatctgtggttacattttcaaagacgcagaactctccgtacctgtgcagagagagctac
agccctcccgcgggaatccgaaagcactttatcccactgtcgcctgtaaagtcagagtcc
tccgagccggatgattgtgctccctgggttatgagcccaagattctctgcacaaacgcgg
caggtaagtcctacctgtccgctgcggaagcacaagaccaacagaaagcctcgtactccc
ttcaccacctcccagctgctgtctctggagcgtaagttccgtcagaagcagtacctgtct
attgctgagcgggccgagttctccagctttctgaccttgactgagacccaggtcaagatt
tggttccagaaccgccgggctaaggccaagagactacaggaggccgagttggagaagctc
aaaatggctgccaaacccgcgctgcacccgggctttacgttaccaatgcccctgggagca
cagctccacacagccgtctccctctacggacagtcctacccctaccaccgtcccatgctg
cccctctcacctatggggttgtacgctacacctctgggatacagcatgtatcatctatca
ggatga
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