Oncorhynchus tshawytscha (Chinook salmon): 112228319
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Entry
112228319 CDS
T05605
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112228319 (gabra1)
04082 Neuroactive ligand signaling
112228319 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112228319 (gabra1)
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112228319 (gabra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112228319
NCBI-ProteinID:
XP_042165412
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All DBs
Position
LG30:39534500..39562587
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AA seq
470 aa
AA seq
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MTNHSPTMGGRTGTAILLCVWACLLVANVLCGKSSGQNGQTDEQKDNTTVFTRILDSLLD
GYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVL
RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLE
DFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQ
SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
EKQKKKKESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPP
EAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccactctccaaccatgggtggacggacaggaacggccatactgctatgtgtg
tgggcctgtttgctggtggccaacgtgctttgtgggaaaagctctggacagaatggccag
acggacgagcagaaagacaacactacagtgttcacccggatcctagacagtcttctagat
ggctacgacaatcgtctcagaccagggttgggagagcgtgtaactgaagtcaagactgac
attttcgtgacgagtattgggcccgtctcggaccatgacatggaatacaccattgatgtg
ttcttccgtcaaagctggaaggacgagcggctaaaatttaaagggccaatggcggttctc
cgtttgaacaacctgatggccagtaaaatctggacccctgacacattctttcacaatggc
aagaagtctgtggcacacaacatgactatgcccaacaaactcctacgaatcacagaggag
ggaactctgctctatactatgagactgaccgtaagggcagagtgtcccatgcacctggag
gacttccccatggatgcccatgcttgcccactgaagttcggcagctatgcttacaccagg
gctgaggttgtgtacgtgtggacgagaggggcagcccagtctgttgtggtggctgaagat
ggctctcggctcaaccagtatgatctgatggggcaaagcgtggactctggggttgtccag
tccagcacaggagagtatgttgtcatgacgacacacttccacctgaagaggaagattggt
tattttgtcatccagacgtacctgccctgcatcatgacggtgatcctgtcccaggtgtcc
ttctggctcaacagagagtccgtcccagccaggactgtgttcggagtgacaactgtgctg
accatgaccaccctcagtatcagtgctaggaactctctccccaaggtggcctatgccaca
gccatggactggttcattgcagtctgctatgcctttgtcttctctgccctcattgagttt
gctacagtcaactacttcacaaagaggggctacgcctgggatggaaaaagtgtggtgcca
gagaagcaaaagaagaagaaggagtccctcctgaagaagaacaacaccaccgcctacact
gccgccactgctacagccttcgctccaaacattgccagagatcctggtttggccaccatt
gccaaaagcgctccccctccccccaccgagcccaaggaggaaccaaagcccaagccacca
gaggccaagaagaccttcaacagcgtcagcaagatcgacaggatcgccagaatagccttc
cccttactcttcggaacctttaacctggtctactgggcaacttacttgaataaaaagcct
aagttacagggtatgaccccaggatcccactaa
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