Oncorhynchus tshawytscha (Chinook salmon): 112228341
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Entry
112228341 CDS
T05605
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
KO
K03494
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4C) [EC:
2.4.3.2
2.4.3.4
2.4.3.6
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00601
Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112228341
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112228341
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
112228341
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
112228341
2.4.3.6 N-acetyllactosaminide alpha-2,3-sialyltransferase
112228341
Glycosyltransferases [BR:
otw01003
]
Terminal extension
Sialyltransferase
112228341
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
RT_RNaseH
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
112228341
NCBI-ProteinID:
XP_024249337
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Position
LG30:35413710..35462061
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AA seq
413 aa
AA seq
DB search
MYVSRKLLPREKEYSIVKKDCLAMKWALATLKYYLLGRKFILITDHAPLMWMARDKDTND
PVTRWFLSLQRFSFSVIHRSGAQHDGTPRERRERDRHQLRERRKTAKPEQNSERAFSKAL
CDSWNISQKWERLNFNVSRNAQLFLKLEDFFWRRYLSTLALPYGVKGSELFLMKALAAMA
SYDMPETIKHLPCKTCMVVGNGFAIKNTSLGSAINKYDIVIRLNDAPVRGYEADVGNKTT
MRLFYPESASYNPSIHNDPDTLMVLVPFKQQDVRWLKEILYNEKRIRKGFWKPPPEIWLG
KTSHIRILDPYFLQQTASRLLRLPLNTPPKTNQIPAHPTTGILAIYVALNYCDVIHIAGF
GYPESKDLKHPIHYYGYDTMKSMKNSYHNLSHEVKALKRLEDSGAVVYLHPHS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcagcaggaagcttctcccgagggagaaggaatactcaattgtcaagaaggac
tgcctcgccatgaagtgggccctcgccaccctcaagtattacctcctcgggaggaagttc
atcctgattactgaccatgcccccctcatgtggatggcacgagataaggacacgaatgac
cctgtcacccgctggttcctgtccttacagcgattctctttctctgtcatccacaggtcg
ggtgcccagcacgatggcacaccgcgggagagaagggagagagacagacaccagttaaga
gagagaaggaagacagcaaaacctgagcaaaatagtgaaagggctttcagtaaggccctc
tgtgacagctggaatatctctcagaagtgggagagactcaacttcaatgtgagcaggaat
gctcaacttttcttgaagctggaggatttcttctggcgacgctacttgtccacgttagcc
ttgccttatggtgttaagggcagtgagctttttctcatgaaagcattggcagccatggct
agctatgacatgcctgagacgataaaacatttgccttgcaaaacctgcatggtggttgga
aatgggttcgcgatcaagaacacctcgttaggaagcgccattaacaagtatgacatagtg
atcagattgaacgatgcaccagttcgggggtatgaggccgacgtggggaacaagactacc
atgcgcctcttctaccctgagtcggcttcctacaaccccagcatccacaatgaccctgac
accctcatggtcctcgtgcctttcaagcagcaggacgtgcgctggctcaaagagatcctg
tacaatgagaagaggatcagaaagggcttctggaaaccccctcctgagatctggttgggt
aaaacaagccacatccgcatcctggacccctacttcctgcagcaaactgccagccgcctg
ctccgcttgcctctcaacacacctccaaagaccaaccagatcccagcgcaccctacaact
ggcattctggccatctacgtggcccttaactactgtgacgtgatccacatcgctggattt
ggctacccagagtctaaagacctgaagcaccccattcactactatggctatgacaccatg
aagtctatgaagaattcgtaccacaacctctcccatgaggtgaaagctctgaagcgacta
gaggactctggtgctgttgtatacctacaccctcactcctga
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