Oncorhynchus tshawytscha (Chinook salmon): 112228342
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Entry
112228342 CDS
T05605
Symbol
dcps
Name
(RefSeq) m7GpppX diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112228342 (dcps)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112228342 (dcps)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
112228342 (dcps)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
112228342 (dcps)
3'-5' decay
Other 3'-5' decay factors
112228342 (dcps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
DUF2145
Motif
Other DBs
NCBI-GeneID:
112228342
NCBI-ProteinID:
XP_024249345
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All DBs
Position
LG30:35392529..35401814
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AA seq
330 aa
AA seq
DB search
MAETGKREVDFADRNETDTVKAKRLKNDPNSDQDNHNESVSANPLFGFKTTTVLRDSARE
KNMFIHGKLNDQDAVIILEKTPIREDTLLEIFNGSRLKLDMRNDIYSTYQLQPPAHLNEM
KTTVVCPATEKHVKKYLRQETYLVQETGEDYRSITLPYIQSQSFSVQWVYNILEKKAEAE
RIVYEDPDQDVGFVLLPDFKWDQKQLDDLHLIAIVHRRDIKSLRDLTALHLPLLTNICKK
GEESILKRYGVAASKLKVYLHYQPSYYHLHIHFNALSYEAPGCGVEHAHLLSDVIQNLQA
DSQYYHSRSLSFPLRADQGLLSKFKDAGKL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcggagactggtaaacgtgaagttgattttgcggacagaaatgaaactgatactgtt
aaggccaaacgactaaagaatgacccgaatagtgaccaagataatcacaatgaatcagta
tctgcaaatcctttgttcggatttaaaacaacaacggttctgcgggactctgcacgggag
aaaaatatgttcatacacggaaagttgaacgaccaggatgcggtcatcattctggagaag
acccctatcagggaagacaccctgttggagattttcaatggctccagactgaagttagac
atgaggaatgatatctacagcacgtatcaactccaaccccctgctcatttgaatgagatg
aagaccacagtggtgtgtccggccacagagaagcatgtgaagaaatacctgcgccaggag
acctacttggtgcaggagactggggaggactaccgctctatcaccctaccttacattcag
agtcagagcttcagtgtacagtgggtctacaacatcttggagaagaaagcggaggcagag
cgcatcgtttatgaggacccagaccaggacgtcggctttgtcctgctcccagacttcaag
tgggatcaaaagcagttggatgacttgcatttgattgccatcgttcatcgaagggacatc
aaaagtttgcgagacctgacagcgctgcatctgccattgctgactaacatctgcaagaag
ggagaggagagcattctgaagcggtacggtgtggcagccagtaagctgaaggtgtacctc
cactaccaaccgtcctactaccacctccacatccacttcaatgccctgagctacgaggcc
ccgggctgcggggtcgagcatgcccacctgctttcggacgtcatccagaacctccaggca
gactcccagtactaccacagtcgctccctctccttccccctgcgggctgaccaaggcctg
ctcagcaagttcaaggatgctggcaaactgtag
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