Oncorhynchus tshawytscha (Chinook salmon): 112228352
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Entry
112228352 CDS
T05605
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112228352 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112228352 (dtx2)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112228352 (dtx2)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112228352 (dtx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-rbx1
WWE_5
Motif
Other DBs
NCBI-GeneID:
112228352
NCBI-ProteinID:
XP_024249369
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All DBs
Position
LG30:complement(34969165..34988664)
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AA seq
622 aa
AA seq
DB search
MATASSSCVGINGSRNGPSLSTPTLVAPGQSQPMVVVWEWQDDLGFWRPYSGQVSGYIEQ
YFSPRGHRGGGPGSTSISLGQSDPSLSPYLIDIPSLNQFRQDTGKTRSVRRQLFAQSSGL
GSGVYWEWANDEGGWTPYETRTSILLEHSYLARQATADMASHGYNYIVDLTALAQVNKAT
GFRRQVRRQGNFPYPLASGASVIHSGPACSCHQCLSHSCTGPMPSRSRHSFSSGQLSRPS
FQGPSRAAGAHPTSVYSPYPRRPLSVGGMAWGGPWPPTPSASQFPGPPLSYPTSGNGLSV
PAIPLQRNGSTSVSSALAGMASILMSAVGLGVRFTSAPLPHPSSVPPPPSSTSRPAGSKT
HSSSSVRRAKRQHRTAQKPEDVIHRYMEEVASAQDEDCMICMDRLSCPSDYAVASEGAQS
IPPGAVGKFTKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEIYSI
AQSLPGHPDCGTIQIIYSIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKGRKVLELLK
VAWTRRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLENVLSELSSQG
VTDDCLVKQEGPSQGGASNSGL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcctctagctcatgtgtggggataaatgggtctaggaatggaccctctctc
tctacaccgacattggtagcacctggacaatctcagcctatggtcgttgtatgggaatgg
caggatgatcttggcttctggcgaccatatagcggccaggtgagcggctatatcgaacaa
tacttctctccgcggggacacagaggtgggggtccgggctccaccagcatcagcctagga
caatccgatcccagtttgtcgccttatctcatagacataccaagcttgaaccagttccgc
caagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggcttg
ggtagcggagtatattgggagtgggcaaatgacgaaggaggatggactccgtacgagact
cgcacttctattctactagaacacagctacctggcacggcaggccactgcggatatggcc
tcacatggctataactacatagtggacctcacagcgctggcccaggtcaacaaggccaca
ggcttcaggcggcaggtccgacggcagggtaacttcccctacccgctggcgtctggcgcc
tccgtcatccactcgggcccggcttgctcctgccaccagtgtctgagccacagctgcact
ggccccatgcccagccgttcacgccactccttctcctctgggcagctgagccggcccagc
ttccagggccccagcagggcggctggagctcaccccacctcggtgtactcgccctacccc
aggaggcctctttctgtggggggaatggcgtggggtggtccctggcccccgacaccctcc
gcaagtcagttccctggacctccactgtcttaccctaccagtggcaatggcttaagtgtc
cccgccatccctctgcaacggaatggatccaccagtgtgagctcagcccttgcaggcatg
gcctccattttgatgtcagcagtgggactcggcgtgcgcttcacgagtgcccccctcccg
cacccctcctccgttcctcctccccccagcagcaccagcaggcccgcaggctccaaaact
cacagcagcagctcggttaggagggcaaagaggcagcacaggacagcccagaaaccagag
gatgtcattcaccgctacatggaggaagtggcctctgctcaagacgaggactgcatgatc
tgtatggaccggctgtcgtgtccgtcggattacgccgtggcgtccgagggagcacaatcc
atcccacccggcgctgtgggaaagttcaccaagtgtggacacaccttgcacatgctctgc
atgcttgccatgtacaacaatggaaccaaggatggcagcctccagtgcccgtcatgcaag
acaatctatggggagaagactgggactcagcccaagggcaagatggagatctatagtatc
gcacagtccctccccggccacccagactgtggaactatccagataatttacagcattccc
cctgggatacagggtccagagcaccctaacccggggcagccatacacctgtagaggcttc
cctcgcttctgcttcctcccagacaacgacaagggccgaaaggtgcttgaactgctgaag
gtagcgtggacgcggcgcctcatcttcacagtgggcacgtctagcaccacgggtgagccc
gacacggtggtgtggaatgagatccaccacaagactgagatgatgtccaacgtgtcaggc
cacggctacccggaccccaactatctggaaaatgtgctgtccgagctgtcctcccagggg
gtgaccgacgactgcctggtcaaacaggagggccccagccagggaggagcgtcaaactct
ggactgtga
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