KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112228393
Entry
112228393         CDS       T05605                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112228393 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112228393 (cul5b)
   03400 DNA repair and recombination proteins [BR:otw03400]
    112228393 (cul5b)
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     112228393 (cul5b)
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112228393 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 112228393
NCBI-ProteinID: XP_024249440
LinkDB
Position
LG30:complement(32431140..32452536)
AA seq 806 aa
MHSLLTATRFGNTSLNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLW
DDKGPAKIHQALKEDILDFIKQAQARVLSHQDDTALLNAYIVEWRKFFTQCDILPKPFCQ
LEITLMGKQGCNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFD
SQLVIGVRESYVNLCSNTDDKLQIYRENFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKY
ADAKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKQNETESE
YGRSAPGTKGSASSELHLMFSLMDKVPSGIEPMLNDLEDHVMSAGLADMMASAETITSDS
EKYVEQLLTLFNSFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLK
TQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAH
LTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSDDLNQNFKECHKHN
KLALSGKPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWH
HLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTL
WSLVAFPKLKRQVLFYDPVVGSPKDFAEGTLFYVNQEFSLIKNSKVQKRGKINLIGRLQL
TTERMREEENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQTELVEILKNMFLPQKKMIK
EQMEWLIEHKYIKRDETDLNTFLYMA
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgcacagccttttaacagcgacacgttttggaaacacatctctgaacaaaggctccctc
cagttcgaggacaagtgggacttgatgcgtcccatcgtcctcaagctgctccgccaagag
tcagtcaccaaacagcagtggttcgacctcttctcagatgtccatgcagtatgcctatgg
gatgacaaggggccagccaagattcaccaggccctgaaagaggacatcctagacttcatc
aagcaagcacaagcacgggtgttgagccaccaggatgacacggcgctgctgaatgcctac
atcgttgagtggaggaagttcttcactcagtgtgacatcctgcccaaacccttctgccag
ctggaaattacgctcatgggcaaacagggctgcaacaagaagtctaacgtagaggacagc
atcgtacggaagctcatgctggacacgtggaacgagtccatcttctccaacatcaagaat
aggctccaggacagcgccatgaagctggtgcatgccgagcgcctgggggaggccttcgac
tctcagctggtcattggtgtcagggagtcttatgtgaacctgtgctcaaacacggatgac
aagttgcagatttacagagagaactttgagaaggcctacatggactccaccgagaggttc
tacagaacacaggccccctcctacctgcagcagaacggagttcagaactacatgaaatat
gcagacgccaagttgagagaggaggagaaacgggcgctgcgctacttggagacgagacgg
gaatgtaactctgtacaagcactgatggagtgttgcgtgaacgccctggtgacgtccttt
aaggagaccatcttggccgagtgtccaggcatgatcaagcaaaatgagacagagagtgag
tacggccggagtgctcctggcaccaaaggctcggccagctcagagctccacctcatgttc
tctttgatggacaaggtgcctagtggcatcgaacccatgctgaatgacctagaggaccac
gtcatgtctgctgggctggccgacatgatggcctccgccgagaccatcacctcggactct
gagaagtacgtggagcagctcctcaccctgttcaacagcttcagtaaactggtgaaggat
gcctttcaggatgaccctcgcttcctcacagccagggacaaggcttacaaagcagttgtg
aacgacgctaccatttttaaattagaactcccgctgaagcagaaaggggtgggtctgaag
acccagccggagtcaaagtgtcctgaactgctggccaactactgtgacatgctgctgagg
aaaaccccgctcagcaagaaactcacctctgaggagatcgaggccaagctcaaggaagtg
ttgctggtgttgaagtacgtgcagaacaaagacgtgttcatgcgctaccacaaagcccat
ctgacgcgacgcctcatcctggacatctccgccgacagcgaaatcgaggagaacatggtg
gagtggctcagggaggtaggcatgcccgcggactacgtgaataagctggcccggatgttc
caggacatcaaggtgtccgatgatctcaaccagaacttcaaagagtgtcacaaacacaac
aagctggccctatcaggtaaaccagcggactctgtcaacatcaagatcctgaatgccggg
gcgtggtctcgaagctcagagaaggtgtttgtgtcactgcccactgaactggaggatctc
atccccgaggtggaggacttctacaagaagaaccacagcggcaggaaactgcactggcac
cacctcatgtccaatggcattatcacctttaagaacgaggtgggacagtacgacctggag
gtgaccaccttccagctggcagtgctttttgcctggaaccagaggccccgggagaggatc
agctttgagaacctcaagctggccacggagctgcctgacgctgagctccgacgcacccta
tggtccctggtagcgttccccaagctaaagcggcaggtgttgttctacgaccccgtggtg
ggctcgcccaaagactttgccgagggcacactcttctacgtcaaccaggagttctcacta
ataaaaaactccaaggtccaaaagagggggaagatcaacctgattggccggcttcagctc
accacggagcgaatgagggaggaggagaacgaaggaattgtccagctcaggatattgaga
acacaggaggccatcatccagatcatgaagatgaggaagaggatcaccaatgcccagctg
cagacggagctggtggagatcctcaaaaacatgttcctaccccagaagaagatgatcaag
gagcagatggagtggctcatcgagcacaagtacatcaagcgcgacgagactgatctcaac
accttcctctacatggcgtag

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