Oncorhynchus tshawytscha (Chinook salmon): 112228401
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Entry
112228401 CDS
T05605
Name
(RefSeq) homeobox protein otx5-like isoform X1
KO
K18490
homeobox protein OTX2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228401
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112228401
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
112228401
NCBI-ProteinID:
XP_024249464
LinkDB
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Position
LG30:32020460..32023469
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AA seq
307 aa
AA seq
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MMSYIKQPHYAMNGLNMPGMDLLHTTAGYPFSVSLDFSATPRKQRRERTTFTRTQLDILE
SLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKTS
PAQDQPSAGPDPSANNPSGSYSPSSAPSGPSLPPSGNNPGNAAVSIWSPAISPLPDPLAS
SAPCMQRPSAYPMSYGQPQAYAQGYAQGYAGTSSYFTGLDCGAYLSPMHSQLSASGALSP
ITVPSMGGSLSQSPASLSSQGYGTAASLGFTSVDCLDYKDQQAWKLGFSTMDCLDHKDQN
SWKFQVL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccccattacgccatgaacgggttaaacatgcctgggatg
gacctgctacacaccacggctggatacccattctctgtgtctctggatttctcagccacc
ccacgaaagcagcgtcgcgagcgcaccaccttcacacgcactcagctggatatcctggag
tccttgttctccaagacccgctaccccgacatcttcatgagggaagaggtggccctcaag
atcaacctccccgagtcacgcgtacaggtgtggttcaaaaaccgccgcgccaagtgccgc
caacagcagcagcagagcagcggccagtccaagccccgcccgcccaaaaagaagacgtcg
cccgcccaagaccagcccagcgccggcccagacccctcagccaacaacccctctggttcc
tacagcccctcctcagccccatcgggcccctccctgccgcccagcggcaacaaccctggc
aatgcagccgtctccatctggagcccggccatctcaccactccctgaccctctggcctct
tcggcgccctgcatgcagcggccctctgcctacccaatgagctacggccagccgcaggcc
tacgcccagggctatgcccagggctatgccggcacctcctcctacttcacgggcctggac
tgcggcgcctacctgtcgcccatgcattcgcagctgtcggctagcggtgccctcagcccc
atcaccgtgccctcaatggggggttcgctgagccagtcacccgcctcgctctcctcccag
ggctacggcacagccgcctcgctgggcttcacctccgtcgattgcctggactacaaagac
cagcaggcctggaagctgggctttagcaccatggactgcctggaccacaaagaccagaat
tcctggaagttccaggtgctgtag
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