Oncorhynchus tshawytscha (Chinook salmon): 112228410
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Entry
112228410 CDS
T05605
Name
(RefSeq) unconventional myosin-VIIa-like isoform X1
KO
K10359
myosin VIIa
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112228410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228410
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112228410
04812 Cytoskeleton proteins [BR:
otw04812
]
112228410
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112228410
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
USH complex and associated proteins
112228410
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112228410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MyTH4
FERM_M
IQ
SH3_9
AAA_22
nSTAND3
PID
SH3_1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112228410
NCBI-ProteinID:
XP_042164960
LinkDB
All DBs
Position
LG30:complement(32265659..32351050)
Genome browser
AA seq
2196 aa
AA seq
DB search
MVILQQGDYVWLDLKTGREFDVPVGAVLKLCDSGQIQVLDDEGREHWISPQNATNIKPMH
PTSIHGVEDMIRLGDLNEAGILRNLLIRYNERVIYTNCGGRTYTGSILVAVNPYQLLPIY
TPDQIRLYTNKKIGEMPPHIFAIADNCYFNMQRNNKDQCCIISGESGAGKTESTKLILQF
LAAISGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNKRGAIEGAKIEQ
YLLEKSRVCRQAADERNYHIFYCMLRGMAPELKTKLGLGLATDYSYLTMGNCTKCDGRDD
LKDYSSILSAMKVLMFTETENWEISKLLAAILHMGNLRYEAHTYDNLDACVVVQSPDLST
AASLMEVDSKDVMSCLTTRTLITRGESVSTPLSMEQGLDVRNAFVKGIYGRLFVWIVDKI
NAAIFRPPSCESKIVRRSIGLLDIFGFENFTVNSFEQLCINFANENLQQFFVRHVFKLEQ
EEYNLEDINWQHIEFTDNQDALDMIANKPMNIISLIDEESKFPKGTDATMLYKLNSQHKL
NTNYHPPKNTYMTQFGIQHFAGVVHYETRGFLEKNRDSLHTDIIQLVHSSKNKFIKQIFQ
ADVAMGVETRKRSPTLSSQFKRSLELLMRTLNACQPFFVRCIKPNELKKPMLFDRELCVR
QLRYSGMMETIRIRRAGYPIRYTFGEFVDRYRVLMPGVKPANRQEDLRGTCQKIVEAVLG
RDDDWQIGKTKIFLKDHHDMQLEIERDKAITDKVILIQKAVRGMKERTNFLRVRRSVTLI
QKTWRGYRCRKDYSAMRVGFLRLQALYRSRKLFVTYRLAKTRVTQIQARCRGFMVRRSFW
RQLHAVITIQAYARGMIARRVTQRLRAEHRRRQEAEGQRLAEEERLMNQMTARRARAEAE
RSHQERLAELTRQEEQREKEAREEARRKKELVEQVERERQQPVDHSDMVDQMFGFLGNTG
ALPNLEGQGPAGFEDLEVAPRAEGEEEDLDETLPLPDDEEEDLSEYKFSKFAATYFQGTT
THTYVRRPLKQPLLFHEDEGDQLAALAVWVTVLRFMGDLPEPKYHIAIIDGSEKIPVMTK
IYETLGKRTYKRELQELQTVEGENSSIEGGGGQKKNSVRHKLVSLTLKRKSKITEEVTRR
LTDGDYSLQGNSMLEDRPTSNLEKLHFIIGNGILRPALRDEIYCQICKQLTQNPSKSSHA
RGWILLSLCAGCFAPSEKFVKYLRTFMISGPPGYAPYCEERLRRTFVNRTRTQPPSWLEL
QATKSKKPIMLPVTFMDGTTKTLLTDSATTASELCNALADKISLQDRFGFSLYIALFDKV
SSLGSSSDHVMDAVSQCEQYAKEQGAQERNAPWRLFFRKEIFTPWHNPGEDSVATNLIYQ
QTVRGVKFGEYRCERDEDLAELASQQYYIDYGSGILQERLLNLIPSYIPDREISSAKTND
KWAQLVVAAHKKGVYTQKRLDPQRVKEDVVDFARFKWPLLFSRFYEAFKFSGPSLPKNDV
IVAVNWTGVYFVDEQEQVLLELSFPEITNVSSSRIISLDRGGKLQGQSFSLATIKGDEYT
FTSNNAEDIRDLVVTFLEGLRKRSKFVVALLDCPNPAGGEDSTFLSFSKGDLILLDEHCG
EQVMTSGWAHGVNDRTKQQGDFPADCVYVLPTVTRPQYDIVALVTMTPDQRRESINLSQL
ALAESEDKVKPYTLEEFSYDHFRSPPKSTLSRVMITKGRGKERLWCCAREPLKQPLLKKV
LAHEELSQEAQLAFIALLKYMGDYPSKRARSVNELTDQIFEGALKAEPLKDEIYCQILKQ
LTENHIKYSEEKGWELLWLCAGLFPPSNILLPHVQKFLQAKKHHPLAPDCMQRLQKALRN
GSRKYPPHLVEVEAIQHKTTQIFHKVYFPDDTDEAFEVESSTKAKDFCLNISGRLLLKSS
EGFSLFVKITDKVISVPEGDFFFDFVRHLTDWIKKARPAKDGVVPSLTYQVFFMKKLWTN
TIPGKDSMADYIFHYYQELPKYLRGYHQCSREEVFQLGALIYRVKFEEDKSQFPNIPKML
KELIPQDQIRHLSPDDWKRSIVAFFNKQSGKTREEAKLSFLKVIFKWPTFGSAFFEVKQT
SDPNFPEILLIAINKHGVSLIDPKSKDILTTHPFTKISNWSSGNTYFHITIGNLVRGTKL
LCETSLGYKMDDLLTSYISQMLTTMTKQRGSRGNIK
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atggtcattctgcaacagggggactatgtctggttggaccttaagacaggccgggagttc
gatgtcccagtgggagccgtgctcaagctctgtgactcgggacagatccaggtgctggat
gacgaggggagggagcactggatctcgccccagaatgccaccaacattaagcccatgcac
cccacctccatccacggtgtggaggatatgatccgcctgggagacctcaacgaggctggc
atcctgcggaacttgctcatccgctacaacgagcgtgtcatctatacaaattgtggggga
aggacttacacagggtcgattctggtggcggtaaacccttaccagctgctgccaatctac
actccagaccagatccgcctgtacaccaataagaagattggggagatgccacctcacatc
tttgccatagcagacaactgctacttcaacatgcagaggaacaacaaggaccagtgctgc
atcatcagtggtgagtctggggcaggtaagacagagagcaccaagttgatcctgcagttc
ctggcagccatcagtggacaacactcctggattgagcaacaggtcctggaggccaacccc
atactggaagcgttcgggaatgctaagaccatccggaatgacaactccagtcgctttggg
aaatacatcgacatccactttaacaagagaggtgcaatcgagggggcaaagatagaacag
tatcttctggagaagtcccgagtctgcagacaggctgcggatgagaggaactatcacatc
ttctactgtatgttgcggggcatggccccagagctgaagaccaagctgggcctgggccta
gccactgactactcctacctcaccatggggaactgtacaaaatgtgatggccgtgatgac
ctaaaggattactccagcatcctgtcggccatgaaggtgctgatgttcacagagacagag
aactgggagatctccaaactactggctgccatcctgcacatgggcaacctgcgctacgag
gcccatacctatgacaacctggatgcctgtgtggtggtgcaatctccagacctgtccact
gctgcatctctgatggaggtggactctaaggacgtgatgtcatgtctgaccacacgtacc
ctgatcacccggggcgagagtgtgtccactcccctcagcatggaacagggcctggacgtc
agaaacgccttcgtcaagggtatctatgggaggctgtttgtgtggatcgtggacaagatc
aacgcggccatctttagacctccgtcctgtgagagtaagatcgtaaggaggtccatcggc
ctgcttgacatcttcggctttgagaactttactgtcaacagctttgagcagctgtgcatc
aactttgccaatgagaacctgcagcagttctttgtgaggcatgtgttcaagctggagcag
gaggagtacaacctggaggacatcaactggcaacatatcgagttcaccgacaaccaggat
gctctggatatgatcgccaataaacccatgaacatcatatctctcatagatgaggagagc
aagttccccaagggaacagacgccaccatgttgtataaactcaactctcagcacaaactc
aacaccaactaccaccctcctaagaacacctacatgacccagtttggcatccagcacttt
gctggggtggtccattacgagaccagaggcttcttggagaagaatcgtgacagcctccat
actgacatcatccagctggtacattcctccaagaacaagttcatcaagcagatcttccag
gctgatgtcgccatgggtgtggagaccaggaagcgttcccctactctgagcagccagttc
aagcgttctctggagctgctgatgagaacccttaatgcgtgtcagcctttcttcgtccgc
tgcatcaaacccaacgagctcaagaaacccatgctgtttgacagggagctgtgtgtgcgt
cagctgaggtactctgggatgatggagaccattcgtatcaggcgcgccggttaccccatc
agatacaccttcggagagtttgtagaccgctaccgtgttctcatgcccggagtcaaacct
gcaaacagacaggaggacctgagagggacatgtcagaagatagtggaggcagttcttgga
cgagatgatgactggcagattgggaagaccaagatctttctcaaggaccaccatgacatg
cagctggagatagagagggacaaggccatcaccgacaaggtcatccttattcaaaaggct
gtaagaggaatgaaggagaggactaacttcctgagggtgaggaggtcagtgacactcatt
cagaaaacatggcgtggctatcggtgcaggaaggactacagtgcaatgagggtgggcttc
ctgcgcctccaagccctctataggtcaaggaaactctttgtcacctaccgattggccaaa
acgcgagtcacccaaatacaggcccgttgccgtggtttcatggtgaggcggtccttttgg
cggcagctgcatgcggtgatcaccatccaggcatatgcccggggcatgatcgcacggagg
gttacccagagactcagggcagagcaccggcggcgtcaagaagcagagggccagcgtctg
gctgaggaggagcgcctgatgaatcagatgacggcgcggcgggcgcgggctgaggccgag
aggagtcaccaggagcgcctggccgagctgacccgtcaggaggagcagagggagaaggag
gcacgggaggaggcacgacggaagaaggagctggtggaacaggtggagcgggagaggcag
caaccagtggaccactcagacatggtggaccagatgtttggcttcctggggaacacaggg
gcactgcccaacctggagggacaggggccggccggcttcgaggacctggaggtggctccg
cgggccgagggggaggaggaagacttggacgagactctccctctgcctgacgatgaggaa
gaagacctgtcggagtacaagttctctaagtttgccgccacctacttccagggcaccacc
acgcacacctatgtgcggcgcccgctcaaacagccgctgctcttccacgaggacgagggc
gaccagctggccgcgctggcagtgtgggtcacagtgctgaggttcatgggggacctgccc
gagcccaagtaccacatcgccatcattgacggctctgagaaaatccctgtcatgaccaag
atctacgagacgctgggcaagaggacctacaagagagaactacaggagctccagactgtg
gagggagagaacagctccattgaaggtggtggtgggcagaagaagaacagtgtgagacac
aagctggtctctctcaccctgaagaggaagtccaaaatcactgaagaggtgacccggcgt
ttgactgacggcgattacagcctacaggggaacagcatgctggaggaccgtcccacatcc
aacctggagaagctgcacttcatcattggcaacggcatcctaaggcccgccctcagagat
gagatctactgtcagatctgcaagcagctgacccagaacccgtcaaagagtagccatgcc
cgtggttggatcctgctctctctctgcgctggctgcttcgctccctctgagaagtttgtc
aaatatttgcgtacattcatgatcagtggtccgccgggctacgctccatactgcgaggag
aggttgaggaggacctttgtgaatcgcaccaggacccagccgccatcttggctcgagctg
caggccactaagtcgaagaagcccatcatgttaccggtgaccttcatggatggtaccact
aagaccctgctgaccgactcagccaccacagccagcgagctgtgtaatgccctggcagac
aaaatcagcctccaagaccgcttcggtttctccctctacatcgccctgttcgataaggta
tcctcattggggagcagcagcgaccatgtgatggacgccgtgtcgcagtgtgagcagtac
gccaaggagcagggagcccaggagaggaatgccccctggcgcctgttcttcaggaaagag
atcttcactccctggcacaatcctggcgaagacagcgtggccaccaacctcatctaccag
cagactgtccgtggggtcaagttcggcgagtaccgctgcgagagggatgaggatctggcg
gaactggcatctcagcagtactacatagactacggctctgggattctccaggagcgcctc
ctcaacctcatcccatcctacatccctgaccgcgaaatcagctctgccaagaccaatgac
aagtgggcccagctagttgtcgccgcccacaaaaagggagtctacacccagaagaggttg
gaccctcagagggtgaaggaagacgtggttgactttgctcgtttcaagtggcctttactc
ttctcacgcttctacgaggccttcaaattttcagggcccagcctgcctaagaatgacgtc
attgtggcggtgaactggaccggggtctattttgtggatgagcaggagcaggtccttttg
gaactctctttcccagagatcactaatgtgtccagtagcagaatcatttcccttgacaga
ggtggtaagctccagggccagagcttctcgctggccaccatcaaaggagacgagtacacg
ttcacctccaataatgcagaggacatacgcgacctcgtcgtgaccttcctggagggcctc
aggaagaggtcaaagtttgtggtggcgctgctggactgccccaaccccgcgggcggcgag
gactccaccttcctcagtttttccaagggcgacctgatcctattggacgagcactgtggc
gagcaggtcatgacctcggggtgggcccacggggtcaatgacaggaccaagcaacagggg
gacttcccggccgactgcgtctacgtcctgcccaccgtaacccggccgcagtatgacatc
gtggctctggtgactatgactccagaccagagaagagagtccataaacctgtcccagctg
gcccttgctgagagtgaggacaaggtcaagccctacaccctagaggagttctcctatgat
cacttcagatcccctcccaagagcactctgagcagggtaatgatcactaagggccgcggg
aaggagcgtctgtggtgctgcgccagggagcccctcaaacagcccctattgaagaaggtg
ctggcccacgaggagctctcccaggaggctcaactggccttcatcgccttgttgaagtat
atgggtgactacccgtccaagcgagcgcgttcggtcaacgagctgaccgaccagatcttt
gagggagcgctgaaggcagagccactcaaagatgagatctactgtcagatcctcaaacag
ctcactgagaatcacatcaagtacagcgaggagaagggctgggagctgctgtggctgtgt
gcaggtctgttcccccccagtaacattctgctaccccacgtccagaagttcctccaggcc
aagaagcaccatcccctcgcccctgactgcatgcagagactccagaaggcattacgtaat
ggatccaggaagtacccacctcacctggtggaggtggaggccatccagcacaagaccaca
caaatctttcacaaagtgtacttccccgatgacacagacgaggctttcgaagtggagtcg
agtaccaaggccaaagatttctgtctgaacatctcaggcagactactcctcaagtcctcc
gagggcttcagcctgtttgtcaagatcactgacaaggttatcagtgtgcctgagggggat
ttcttctttgactttgtgagacatctgaccgactggatcaaaaaagccagacctgcaaag
gacggtgtagtgccttcactgacctatcaggttttcttcatgaagaaattgtggaccaat
accataccagggaaagactccatggctgactatatctttcactactaccaggagcttcca
aagtatctccgtggttaccaccagtgttcccgggaagaggttttccagctgggagcgctg
atctacagggtgaagtttgaggaggacaaatcccagtttccaaacattcccaagatgttg
aaggagctgatccctcaggaccagatcagacacctctcgcctgacgactggaaacggtct
atagtggcgtttttcaacaagcagtcggggaagactcgagaggaggccaagctctcattc
ctcaaagtcatcttcaagtggcctacgtttggttcggccttctttgaagtcaagcaaacc
agtgatccaaacttcccagagatcctcttgatagcaatcaacaaacatggtgtcagcctg
atcgaccccaagtcaaaggacatcttgaccacacacccattcactaagatctccaactgg
agcagtggcaacacctacttccacatcaccatcggaaacctggtccgaggcacaaagctg
ctgtgtgagacctcactgggctacaagatggacgacctcctgacctcttacatcagccag
atgctgaccaccatgaccaaacagcgcggttcccgtggcaacatcaagtga
DBGET
integrated database retrieval system
