Oncorhynchus tshawytscha (Chinook salmon): 112228422
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Entry
112228422 CDS
T05605
Symbol
hnrnpl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112228422 (hnrnpl)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
112228422 (hnrnpl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Bacteroid_pep
Motif
Other DBs
NCBI-GeneID:
112228422
NCBI-ProteinID:
XP_024249498
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All DBs
Position
LG30:complement(31605694..31618302)
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AA seq
558 aa
AA seq
DB search
MAAAAGRYYNEGGRATKRQKTEDGMTTEGYDDPHKTLPSPVVHIRGLVDGIMEADLVEAL
QEFGTISYVVMMPKKRQALVEYEDLNGSCNAVTYAAENQVYIAGHPSFINYSTSQKISRP
GDPDDSRSVNNVLLLTIMNPIYPITSDVLYTVCNNCGPVQRIVIFRKNGVQAMVEFDSVQ
SAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQDADAEGNWN
NSQDPNANPNKRVRQPALLGDHPPEYGSPTGGYHGYHDESGYGPPPHYEGGRRMGPLMGG
RGRGRGGSYGGPGYGHGPPPPGDYSAHADSPVVMVYGLEPAKINADRVFNVFCLYGNVER
VKFMKSKPGAAMVEMGDCYAVDRAISHLNNNFLFEQKLNVCVSKQQAIMPGQSYELEDGS
SSFKDFHGSRNNRFTSPEQAAKNRIQHPSNVLHFFNGQPDISVEIFNGVCEELGVKNPSN
IKLFTGKSGATGERSSSGLLEWESINDAMEALAMMNHYQMKNPSKYSDCDNNTTANDTNG
GPYPYTLKLCFSTAQHAN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcagcaggtcgctactacaacgagggtggcagagcaacgaaaagacagaaa
accgaagacgggatgacgacggagggctatgatgacccccataaaacgctcccttccccg
gtggtccacatcaggggccttgttgatggcatcatggaagcagatctagtggaagccctg
caggagttcgggaccatcagttatgttgtcatgatgcccaagaagcgccaggccctggtg
gagtatgaggacttgaatggatcctgcaacgctgtgacttacgcagctgagaaccaggtc
tacattgctgggcacccctccttcatcaactattccaccagccagaagatctcccggccc
ggagacccagacgactcacgcagcgtcaataacgtgcttctgctcaccatcatgaaccct
atctaccccataacctcggatgtgctgtataccgtctgtaacaactgtgggcctgtgcaa
aggatcgtcatcttcaggaagaatggagttcaggccatggtggaatttgactctgtgcaa
agtgcccagagggcgaaagcctctctaaatggggcagacatctactctggctgctgcaca
ctgaagattgagtacgccaagccaacccgcctcaatgtgttcaagaacgaccaggacacc
tgggactatacaaaccccaacctgagtggccaagatgctgatgctgaaggcaattggaac
aattcacaagatcccaatgccaaccccaacaagcgtgtgagacagccagctctactagga
gaccatcctccagagtatggcagcccaaccggtggttatcacggctaccatgatgaaagt
ggctacggacctcctccacactacgagggtggtcgccgcatggggcctctgatgggaggg
cgtggccgcggacgtggcggcagttacgggggacctgggtatggacatggccctcctccc
cctggtgactacagcgcccacgctgactcccccgttgtcatggtgtacggcctggagccc
gcaaagatcaacgccgacagggtcttcaacgtcttctgtctctacggcaatgtggagcgg
gtgaagttcatgaagagtaagccgggggcagccatggtggagatgggcgactgctacgct
gtggaccgcgccatcagccacctcaacaacaacttcctgtttgaacagaagctcaacgtc
tgtgtgtccaagcagcaggccatcatgcctggtcagtcctatgagctggaggatggctcc
agcagcttcaaggacttccatggctcccgcaacaaccgcttcacctccccggagcaggcg
gccaagaaccgcattcagcacccgagcaacgtcctgcacttcttcaacgggcagcccgac
atctccgtggagatcttcaacggggtctgtgaggaacttggtgtgaagaacccatctaac
atcaaactcttcactggaaagagtggcgcgacaggtgagcggagctcatccgggctgctg
gagtgggaatctataaacgacgccatggaggctctggccatgatgaaccactaccagatg
aagaaccccagtaagtactcagactgtgataacaacaccacagctaatgataccaacggt
ggtccgtacccctacacactgaagctgtgtttctcaaccgcgcagcatgccaactag
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