Oncorhynchus tshawytscha (Chinook salmon): 112228435
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Entry
112228435 CDS
T05605
Name
(RefSeq) transcriptional enhancer factor TEF-3
KO
K09448
transcriptional enhancer factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228435
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
112228435
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Motif
Other DBs
NCBI-GeneID:
112228435
NCBI-ProteinID:
XP_024249566
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All DBs
Position
LG01:complement(16499806..16540750)
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AA seq
466 aa
AA seq
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MRITLPCLVLSLAPGRHHLHPTPSPFPLLGLPPDPSNPSPVLWSPPAPTTSAEWVPAPSP
GGSSEELNEPLDKALENDAEGVWSPDIEQSFHEALSIYPPCGRRKIILSDEGKMYGRNEL
IARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQVKLKAFHLDQAAKDKALQSMATISAT
AFQNKMALQGLSRPPYPTAGGFWHGGPEDIKPFSQQSYAMQTSGPPPITGYESMAGLSMS
PGAPPWQGRSIASSKLRMLEFSAFLEQPQDPETFNKHLFVHIGQSNPTFSDPYLEAVDIR
QIYDKFPEKKGGLKELFEKGQPDTFFLVKFWADLSANLQEDRGFFYGVSSQYESSENMII
TSSTKVCSFGKQVVEKVETEYARFENGRYVFRIHRSPLCEYMINFIHKLKHLPEKYMMNS
VLENFTILQVVINRDTLETLLCIAYVFEVSTSEHGAQHHIYRLVKD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcactctcccctgtcttgttctgtcattggcccctggaagacaccatctacac
cccaccccaagccccttccccctcctgggtctaccccccgatccctccaaccccagccct
gtcctgtggtccccccctgcccccaccacgtctgcggagtgggtgccggccccctcccct
gggggcagcagtgaggagctgaacgagcctctggacaaggctctggagaacgatgcggag
ggcgtgtggagccctgacatcgaacagagcttccatgaggccctgtccatctacccgccc
tgcggacgcaggaagattatcctctccgacgagggaaagatgtatggacgaaacgagctg
atagcacggtacatcaagctacgcacagggaagacgcggacaagaaagcaggtgtccagt
cacatccaggtgctagcgcgacggaaggcccgggagatccaggtgaagctgaaggcattt
catttggaccaggctgccaaagacaaggccctccagagtatggccaccatctccgccacc
gccttccagaacaagatggctctgcaggggctgtccaggccgccgtaccccactgctggt
ggcttttggcatggcggtcctgaagacattaagcccttttcccagcagagttacgccatg
cagacgtccggcccaccccccataacaggctatgagagcatggcaggcctgtccatgtca
ccgggcgcccccccgtggcaggggcggagtatcgccagctccaaactccgcatgctggag
ttctctgccttcctggagcagcctcaggacccagagacctttaacaagcacctgtttgtg
cacatcggtcagtccaaccccaccttcagtgacccttacctggaggcagtggacatccgt
cagatctacgataagttccctgagaagaagggagggctaaaggagctgtttgagaagggg
cagccagacactttctttcttgtcaagttctgggccgatctgagtgccaacctgcaggaa
gacagaggtttcttctacggcgtgtccagtcagtacgagagctcggagaacatgatcatc
acctcctccaccaaggtctgctcctttggaaagcaagtggtggagaaagtagagacggag
tatgcacggtttgagaatgggcggtatgtgttcaggatccaccggtccccactgtgtgaa
tacatgatcaacttcatccacaagctcaaacacctgccagagaagtacatgatgaacagt
gtactggagaacttcaccatcctacaggttgtgatcaacagggacacactggagaccctg
ctgtgtatagcctatgtctttgaggtgtctactagtgagcatggagcccagcaccatatt
taccggctggtcaaagactaa
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