Oncorhynchus tshawytscha (Chinook salmon): 112228452
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Entry
112228452 CDS
T05605
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3 isoform X1
KO
K11491
condensin-2 complex subunit D3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112228452 (ncapd3)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
112228452 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
Adaptin_N
HEAT_2
Cnd3
Motif
Other DBs
NCBI-GeneID:
112228452
NCBI-ProteinID:
XP_024249550
LinkDB
All DBs
Position
LG30:complement(29485354..29521133)
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AA seq
1414 aa
AA seq
DB search
MELIHALDFLKLKDVSGGWVDAVWDFEFTETEPLDAAIVIKNGSKEFKTLYSHLLPYMTD
TEVSPLGTDGASQSVWTVFGDNGVSVKSLVAVLSYFVLGGKSKTASVQQRISALQASSLY
LLLLGIPGSVVNKMFHQILFDTCLNTVSNCWPQSLVKKRKKDTLKSSQADGKRSKPHRKD
DDEMDVDEDEEQDEEVHLSPQDLLKIREGVVLLVKSLLRLLLKFPLKDEPQSADNCVQMF
AKLTNFEPVIGELSFGAGQDIDDMRTMPELAYYGLWLLCSSNHGDEKVSLRRVFHRVLYV
ILMMSKGESGKPSLMMATQAVLAARDQAIGFVSHVVDELKEPALPFLRILLQHISFRMVD
KTDYRTRGAQAVAKLLAKMPCGDYASFIKWLFDYSRQSKVAYRMFALDVSMALLEQPERE
ANENVDTELVSFLSHRFLVHNMVFGRRSDASPTVRGHALTCLAQCLELPSMNATRSIKEL
FSTTSAQTVLDGDGSDGSLNSQTTQKTFKTLPFKTIEITNNDHASFESKDTMALLKRRVS
DPKTNVRKCALQAMMGLLKHNVIMLSEGNLTVLSERTRDPALSVKKKALQCLMDLLTAHP
ENSLVQKAWLRGVVPAVVDAESSVQEKALECLEQTILSQVKSHGSYSYRDAQQTLTWDLL
GLLCDHCQDLGRYFSRAFTVWSKQNKFTAAFINNLISHTEAEHAAGAWLLLSKVASSCPR
LDYGKILDAWDDLVRSKNVTVTTSCHILCVIGDIGEHLNEDTKSRIVEDIITWLKSFEMP
LEVISASVETLCRLGKAEAVSDTQTFLNQHCGELVSVCEAYLSGVILNENGAQNLNEDLV
VKHLYTLGVASLHCPSKVGKRIVLLVQSVLTSSVEQQSEGSEELACSQPLSQFKASSMPS
SVRAHAVITLGKLCLQHEELTRKYLPAFARELELCSELAVRSNVVVVMCDLCVRYTNMVD
RYVPNVSACLRDKEPLIRKQTLTMLTNLLQEEFVKWKGSLFFRFIAVLVDSDPTIASLCE
YCLVHLLLKKNPVMFSQHFIECIFHFNSYEKHKTYNKFPQAASEKAKFSLKGAQNKERRF
TIYRFLLVHFTDAQRFNITIKISQNILACFVDGELPLDGDGAVVLAETFGILSLKEIKLS
ALSGAVGAGGDEPQEDEQMAMAKAVMQVAQKKVVSQVQKKVFIESMIPIIINLKSMLEQK
RSPVLKDLMGYLQLTMQDYRSEVKEFFAADEQLAVEMEYNLKMYEKEMEAQMAHCSLGGD
AASGGTPILGSPAPTSAHRLLQTGFATPQPVGPSHLLTQRLAQSDRRQPAKQRSGPHRSW
VMVTGDRNFTPLDGSVKPKGGVCDRAISTPQGNINEVTFGEGVSAIFSDRRTGSKTGEEG
RVLQLISPDQQTPVPRQWNVQSPLNQKRTRQIHQ
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggagttaatacatgcgctagattttctgaaattgaaagacgtctccggaggttgggtt
gatgctgtgtgggattttgaattcactgaaactgaaccactggatgctgccattgtcata
aaaaatggatccaaggaattcaaaacgttgtacagtcacctgctaccctatatgactgac
actgaggtgtcccctttaggaactgatggtgcatcacaaagtgtctggacagtgttcggt
gacaatggggtctctgtcaagtcacttgtggcggtgctgtcgtactttgtcttgggaggg
aagtccaaaacagccagcgttcagcaaaggataagcgctctacaggcatcctccctctac
ttactgctactgggaattccaggtagtgtggtcaacaaaatgttccaccaaatcctgttc
gacacttgcttgaacaccgtgagcaactgttggccccagagcttggtcaagaagcgcaag
aaagacactttgaagagctctcaggctgacggcaaacggtccaaaccacacaggaaagac
gatgatgagatggatgtggatgaggatgaggaacaagacgaggaggtccatttgtctcca
caggacctcctaaaaatcagagagggagtcgtcctcctggtgaaaagcctcctccggctc
ctcctcaaatttccattgaaggatgagccacagagtgcagacaactgtgtacagatgttt
gccaagctgactaactttgagcctgttattggagaattgagctttggtgctggacaggat
atcgatgacatgaggacaatgcctgagttggcctattacggattgtggttgctctgctct
tcaaatcatggggatgagaaagtgtctctgcgccgggttttccacagagtcctgtatgtg
atcctcatgatgagcaaaggggaaagtggcaagccctccctcatgatggccacccaagct
gtcctcgctgcccgggatcaggccattggctttgtcagtcacgttgttgatgaactgaaa
gagccagcactgccctttctacggatcctcctgcagcacatatccttccggatggtggac
aagaccgactaccgtacgcgtggagcccaggccgttgccaagctgctggccaaaatgccc
tgtggagactatgcgtcattcataaagtggctgtttgattactccagacaatcaaaggtg
gcgtaccggatgtttgcactggacgtgtccatggctctgctggaacagccagagagggaa
gcaaatgaaaatgtggacacagaactagtctccttcctgtctcacaggttcctggtccac
aacatggtgtttggccgtcgctcagacgcttcgcctacagtccgaggccacgcccttacc
tgcctggcccagtgcctggagctgccctccatgaatgccacacgcagcatcaaagagctc
ttctccaccacatctgcgcagactgtcttggatggtgacggttctgatggctctttaaat
tcacagacaacccaaaaaactttcaagactttacctttcaagactattgagatcacaaac
aatgaccatgcaagttttgagtcaaaggacacaatggctttactgaagcgccgtgtgagt
gacccaaagaccaacgtgaggaagtgtgcactgcaggcgatgatgggcctgctgaagcac
aacgtgatcatgctcagtgaggggaatttgactgtgctgtcggaacgcacccgtgacccc
gccctgtctgtcaagaagaaggccctgcagtgcctcatggatctcctcactgcccaccca
gagaacagcctggtacagaaggcgtggctgcggggtgtggtgccggccgtggtggacgcg
gagagctcggtccaggagaaagccctggagtgcctagagcagaccatcctcagccaggtg
aagagccacggctcctacagctacagggatgcccagcagacactgacctgggacctgctg
ggcctgctgtgtgaccactgccaagaccttggccggtacttcagcagggccttcacggtg
tggtccaagcagaacaagttcactgcagccttcatcaacaacctcatctctcacacggag
gcagagcacgcggccggggcgtggctgctgctctccaaagtggccagctcctgcccccga
ctcgactacggaaagatcttggacgcctgggacgacctggtcaggtcaaagaacgtcaca
gtgacaacatcctgccatatcctgtgcgtgatcggggacattggcgagcatctgaacgaa
gacaccaagagcaggattgtcgaggacattattacctggctgaagagctttgaaatgcct
ctggaggtgatcagtgccagtgtggagactctgtgtcgactgggcaaggcagaggcagtc
agtgacacacagacattccttaaccaacactgtggagaactagtctcggtctgtgaggcg
tatctttccggtgtcatcctgaatgaaaacggagcacagaatttgaatgaggatttggtg
gtaaagcacctgtacacactaggcgtggcgtcgctgcattgtccctccaaagtgggcaag
cgcattgtgctcctggtccagtctgtcctcacctccagtgtggaacaacagtcagagggg
tcagaggaattggcctgctctcagcctctgtctcagtttaaggcttcctccatgcccagc
agcgtccgggctcatgctgtcatcactctaggtaagctgtgcctgcagcacgaggagctg
acccgcaaatacctgccggcgttcgcccgcgaactggaactgtgcagtgagttggcggtg
cgcagcaacgtggttgtggtcatgtgtgacctgtgtgtgcgctataccaacatggttgac
cgctacgttcccaacgtgtcggcctgtctccgcgataaggagccgctcatccgcaagcag
accctcaccatgctcactaacctgctgcaggaagagtttgtcaaatggaagggctcgctg
ttcttccgtttcattgcagtgctggtggattctgaccctaccattgctagtctgtgtgag
tactgcctggttcacctcctgctcaagaagaacccagtgatgttctcacagcacttcatt
gagtgcatcttccactttaactcctatgagaaacacaagacctacaacaaattccctcaa
gcggccagtgagaaggctaagttctcccttaaaggagcccagaacaaagagaggcggttc
acgatctataggttcctgctggtgcacttcacagacgcccagcgctttaacatcaccatc
aagatcagccagaacatcctcgcgtgcttcgtggacggggagctgcctctggatggtgac
ggggcggtagtgctggctgagacatttggtatcctcagcctcaaggagatcaagctgtca
gcactgagtggagcggtgggggctggtggtgacgagccgcaggaggacgagcagatggcc
atggccaaggccgtcatgcaggtggctcagaagaaggtggtctcacaggtccagaagaaa
gtgttcatcgagagcatgattcccatcatcattaatctgaagagcatgctggaacagaag
cgctcgccagtcctgaaggacctcatgggctacctccagctgaccatgcaggactaccgc
agtgaggtgaaggagttctttgcagcggacgagcagctggcggtagaaatggagtacaac
ctgaagatgtatgagaaggagatggaagcccagatggcccactgctccctgggaggggat
gctgcctctgggggcacgccgatcctgggctcccctgcccctacttctgcccacaggctc
ctccaaacgggctttgccacgccccagcccgtcggccccagccacctgctcacccaaaga
cttgcccagtcagacaggcgtcagccagcgaagcagaggagcgggccacacaggagctgg
gtcatggtgaccggcgacagaaacttcacacctctggatggatcagtgaagccgaaagga
ggcgtctgcgatcgagctataagcaccccgcagggtaacataaacgaagttacattcggg
gaaggagttagcgccatcttcagtgaccggagaacagggtcaaagactggagaagaagga
cgtgtccttcaattgatctcacctgatcagcaaactccagtgccaaggcaatggaacgtg
cagtccccactcaatcaaaaaagaacaagacaaatacatcagtag
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