Oncorhynchus tshawytscha (Chinook salmon): 112228466
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Entry
112228466 CDS
T05605
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03265
Virion - Ebolavirus and Lyssavirus
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
112228466
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112228466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228466
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112228466
04090 CD molecules [BR:
otw04090
]
112228466
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112228466
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112228466
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112228466
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
NCAM1/2
112228466
CD molecules [BR:
otw04090
]
Proteins
112228466
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
112228466
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112228466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
V-set_CD47
Ig_5
C2-set_2
Pur_ac_phosph_N
Big_10
Motif
Other DBs
NCBI-GeneID:
112228466
NCBI-ProteinID:
XP_024249572
LinkDB
All DBs
Position
LG30:complement(27509734..27822110)
Genome browser
AA seq
1059 aa
AA seq
DB search
MIQTMDLIWALLFFGYAASLQVEITPMQGEISVGESKFFLCEVVGDAKDIDWYAPNGEKL
LPNRQDIIVNRNDESSSTLTIYNADVDNAGVYKCVAKNADKESQGTVNVKIFQKITFKNA
PSPQEFNEGDDADIICDVVSSPPASIIWKHKGSKIQVTKDVRFKIMGNNHLQIRGIKKTD
EGAYTCEARVMARGEIDLKIIKVIVNVLPSIRTRQSEVNATADINQSVMLACDADGFPEP
TVTWARNIIVLESDDKYSLNDDGSELIIKDVKKVDEGDYTCIARNKAGEKEEEVSLNVFV
QPRITYLDNQTASELEEQITLTCEASGDPTPTITWSFGRRFFTDGEQASWTRPETFESLD
GNVMVRSHARVSSLTLKYVQFTDAGQYLCTARNSIGQDQQTMYLEVRYAPKIQGPVTVYT
WERNAANISCEVLAHPGASVVWFRDGQQLPSANTTNVKIYNTPAISYLEVTPDSQNDFGS
YNCTATNLIGTESKEFLLIQADVPSAPAIERVEPFSSTAVVEFEEPDASGGVAILKYRAE
WRMKGQDWTSREYDAEDGLSMITIVGLKPETFYEVKMSAINGKGEGESSTPLNFKTAPVR
YTFTISSVTPTFIPSTSAALKGEPSPPKLEGKLQTMGNALKVNWIKQDDGGSPIKHYLIR
YRAKHVSDWKPEIRLPHGSEYVVLSSLDWNTEYEVYVVAENQQGKSQPGTISFRTAAEPT
AIPDTMTSGSGLGTGAIVGILIVVFVLLLVGVDVTCYFLNKCGFLMCIAVNFCGKSGPGA
KNKDIEEGKAAFIKDESKEPIVEVRTEDRTPNHEGGGPTEPNETTPLTEPEPTADTTATV
VDLLPSIATNSDPVTESFSTAQNSPASETTTLTSSTAAPTLAPTEAKTFPNSTPAPIIQS
STPKASAPAAQFAAQSDGAPLVDLSEAPKAMPLSDPKPATPATSSLEAAKATFNLPSAKA
DAASQSQPEPVQSTPASDSQNKDLQIDCLAKDVFDTLGKSSEAPADSTAAPAPAKDDGKI
MTEDKSIAPEMETEVKKAPTEVKTVPNEAAQTNGNESKA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacaatggatctcatctgggcattgctcttctttggctatgcagcctccctg
caagtggagatcacaccgatgcaaggagagatcagcgtgggggagtccaaattcttcctc
tgcgaagttgttggagatgcaaaggacattgattggtatgccccgaacggcgagaagctc
ttaccgaacagacaggacatcattgtgaaccgcaacgacgagtcctcgtccaccctcact
atctacaatgctgatgtggacaatgccggtgtctacaagtgtgtggccaaaaatgcagac
aaggagtctcagggcactgtcaacgtgaaaatcttccaaaagataaccttcaagaacgcc
ccttccccacaggagtttaatgaaggggatgatgctgacatcatctgtgacgtcgtcagc
tcgcctcccgccagcatcatctggaagcacaaaggctcaaagatccaggttacaaaagat
gttcgatttaagatcatgggcaacaaccacctccagatccgaggcatcaagaaaacggat
gaaggggcgtacacctgtgaggctcgtgttatggccaggggagagattgacctgaagatc
atcaaggtcatcgtcaacgtgctccctagcatccgcaccaggcagtcggaggtgaatgcc
acggcggacataaaccagtctgtgatgctggcctgtgacgctgacggcttccctgaaccc
acagtcacctgggcccgtaacatcattgtccttgaatcggacgataaatacagcttgaat
gacgacggctcggagctgataataaaggatgtcaagaaagtggatgaaggagattacaca
tgcattgcccggaacaaggctggggagaaggaggaggaagtcagcttgaatgtgttcgtg
caacccaggatcacctacctggacaatcagactgcatcagagctggaggagcagatcacc
ctgacttgcgaggcctctggagaccccacccccaccatcacctggagctttggccggagg
ttcttcacagacggagagcaggcttcttggactcggcccgagacgttcgagagtcttgat
gggaacgtaatggtgcgtagtcacgcacgggtgtcctctctaaccctaaagtacgtgcag
ttcaccgatgctggccagtacctctgcactgcccgcaactccattggtcaggaccagcag
accatgtacctggaagtgcgctatgctcctaagatccagggcccagtgacggtctacacc
tgggaaaggaacgctgccaacatcagctgtgaggttctggcccatccgggggcctcggtg
gtgtggttcagagatggccagcagctgcctagcgcgaacaccaccaacgtcaagatctac
aacacaccagccattagctacctcgaggtcaccccagattcccagaatgactttggaagc
tacaactgcacagccaccaacttaattggaacagagtccaaggagttcctcctcatccaa
gcagatgtgccgtcggcgcccgccatcgagcgtgtggagcctttctccagtacagccgtt
gtagagtttgaggagcccgatgccagcggcggagttgccatcctcaaatatcgggccgag
tggcgcatgaagggccaagactggaccagcagggagtacgacgcagaggatggcctgagc
atgatcaccatcgttggcctgaagcccgagaccttctatgaggtcaagatgtctgccatc
aatggcaagggtgagggcgagagcagcactcctcttaacttcaagacagcgccagtccgc
tatactttcacaatttcgtcagtgacaccaaccttcattccttcaaccagtgcagccctt
aaaggggagcccagtccccctaagctggaaggcaagctgcagaccatgggcaacgccctc
aaggtcaactggatcaagcaggacgatgggggctcgcccatcaaacattacctgatcaga
tacagggctaagcacgtttcagactggaagccggagatccgtctgccccatggcagtgag
tacgtggtgctgagcagtctggactggaacacggagtatgaagtctacgtggtggccgag
aaccagcagggcaagtcccagcccggcaccatctcctttaggactgcagcagagcctacc
gccatcccagacaccatgactagcggctcaggcctgggcacgggggccatcgtggggatc
ctcatcgtggtctttgtgctgctgctggtgggtgtcgacgtgacctgctacttcctcaac
aagtgtggcttcctcatgtgcattgccgttaatttttgcggcaagtctggacctggagca
aagaacaaggacatcgaggagggcaaagcggcattcataaaggacgagtcaaaggagccc
atcgtggaggtgaggacagaggaccgcacccctaaccatgaaggggggggacccacagag
cccaatgagaccacccctcttaccgagcccgagcccactgctgacactactgccaccgtg
gtggacttgctcccctctatcgccactaactctgaccccgtcactgagagctttagcaca
gcccagaatagcccagctagcgagactaccaccctcacttccagcacagctgccccaacc
cttgccccgaccgaggccaaaactttccctaatagcacccctgcccccatcatccagtcc
agcacgcccaaagctagcgctcccgccgctcagtttgccgcacaatctgacggggctccc
ctcgtcgacctaagcgaggctccaaaagccatgcccttgtccgaccctaagcccgccacc
cccgcaacctcttccttagaggcagccaaggccaccttcaacctcccctctgccaaagcc
gatgccgcttcacagagccagcccgaacccgtccaaagcacccctgccagcgacagtcag
aataaggacttacagatagactgcctggccaaggatgtgtttgatacactgggcaaaagc
tcagaggccccagcagactccactgctgctcctgcaccggccaaggacgatgggaaaatc
atgacagaagataaaagtatagcgccagagatggagacagaggtgaagaaagccccgacc
gaggtgaagaccgtccccaatgaagctgctcagacaaacggcaacgagagcaaagcatga
DBGET
integrated database retrieval system
