Oncorhynchus tshawytscha (Chinook salmon): 112228468
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Entry
112228468 CDS
T05605
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228468
04121 Ubiquitin system [BR:
otw04121
]
112228468
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112228468
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112228468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_15
zf_UBZ
zf-C2H2_8
Endonuclease_7
MIX
zf-C2H2_REST
zf-C2H2_2
Zn_ribbon_TiaS
zf-MYST
Motif
Other DBs
NCBI-GeneID:
112228468
NCBI-ProteinID:
XP_024249585
UniProt:
A0A8C8HCW5
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Position
LG30:complement(27263959..27433154)
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AA seq
668 aa
AA seq
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MDLTKMGMIQLQNPNHPTALLKKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDDNDTEVNMNEEGTEEDDERNCRQGGKNAKKHSMEGSYHSAVQQASALASMV
DQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQQGFGGEHLTQGNSHHQLMTEIKTEMM
QVDEGGGHGSPRTMESSASSNGKRSGELDKNRDGPGTPTRSSVITSARELHYVREDGMGD
SQADGGQMGLEAMAGMTGMTEKHLASLYSLPTNHKNETMLSMPASMASSLHLSPALAMSM
DFSAYGGLLPQSFIQREFFNKLGELAAGMKPDGRNQHERCNVCGAELPDNEAVEQHRKLH
SGMKTYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEDALEAHRQIHTGS
DMAIFCLLCGKRFQAQPALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHP
YECEFCGSCFRDENTLKGHKRIHTGEKPYECNGCGKRFSLKHQLETHYRVHTGEKPFECK
LCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHRPEDIPPDWRIEK
TYLYLCYV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatttgactaaaatgggtatgatccagctccagaaccctaaccaccccacggccctg
ctgaagaaggctaaccagatgcgtctggcaggaaccctctgcgatgtggtcatcatggtg
gacagccaggagttccatgctcatcggaccgtgctggcctgcaccagcaagatgtttgag
atcctgtttcaccgcaacagccagcattacaccctggactttctttcaccaaagaccttc
cagcagatactggagtatgcctacactgccacactccaggccaaagtggaagacctggat
gacctactgtacgcagcagagatcctagaaattgagtacctggaggagcaatgcctcaag
atcctggagacaatccagtcctcagacgacaacgacacggaggtcaacatgaacgaggaa
ggcacagaggaagacgatgagcgcaattgcaggcaaggagggaagaacgccaagaagcat
tccatggaggggagctaccattcagccgtccagcaagcctcggccctggccagtatggtg
gaccagagcccctctgtctccacatccttcgggctttccaccatgagcccaaccaaagct
gccgtggacagcctgatgagcataggccagtccctcctgcagcagggctttgggggcgag
cacctgactcaaggaaactcccaccaccaattgatgaccgagatcaagactgagatgatg
caagtggatgaaggcggaggccatgggagccccagaaccatggagtccagcgcctccagc
aatggcaaaaggagtggcgagttggacaagaaccgcgatggccccgggactccaaccagg
agcagtgtgatcacgagcgcccgcgagctgcactacgtccgggaggatggcatgggcgac
tcccaagcagatggcggccaaatgggtctggaagccatggcgggtatgaccggcatgacc
gagaaacacctggcctccttgtactcgctgcctaccaatcataaaaatgagaccatgcta
tccatgccggcctccatggcctcttctctccatctgtcccctgccctggccatgtccatg
gacttcagtgcctacgggggacttctgccccagagcttcatccagagggagttcttcaac
aagttgggggagctggctgccggtatgaagccagacggtaggaaccagcatgaacgctgc
aacgtgtgtggcgcagagctaccagacaacgaagcagtggagcaacataggaagctgcac
agcggaatgaagacctatggatgtgagctttgtgggaaacgctttctggacagcctacgc
cttaggatgcacttgctgtctcactcagctggtgagaaggccattgtctgtgaccagtgt
ggggcccagttccagaaggaggatgctctggaggctcacagacagatccacacaggctcg
gacatggccatcttctgcctgctgtgtgggaagcgcttccaggcgcagccggccctgcag
cagcacatggaggtccacgccggtgtgcgcagctacatctgcagcgagtgcaaccgcacc
ttccccagccatacggcactcaaacgtcaccttcgctcgcacacagcaggtgaccatcct
tatgagtgcgagttctgtgggagctgcttccgtgacgagaacactctgaagggccacaag
cgcatccacaccggggaaaagccctacgaatgtaacggctgtgggaagaggttcagcctc
aagcaccagctggagacccactaccgcgtgcacacaggtgagaagccgtttgagtgcaag
ctgtgccaccagcgatccagggactactcggccatgataaaacacctgcgcacccacaac
ggtgcctcgccgtaccaatgcaccatctgcctggagtactgccccagcctctcagccatg
cagaagcacatgaagggccacaggcccgaagacatccccccggactggaggatagagaag
acctacttgtacctctgctacgtctga
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