Oncorhynchus tshawytscha (Chinook salmon): 112228476
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Entry
112228476 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112228476
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112228476
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112228476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
zf-RING_5
zf-C3HC4
FYVE
zf-C3HC4_2
SDE2_2C
Prothymosin
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
112228476
NCBI-ProteinID:
XP_024249601
UniProt:
A0A8C8HHB2
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All DBs
Position
LG30:complement(26979357..26994415)
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AA seq
336 aa
AA seq
DB search
MWTSCCSWFCLEPTATVEENVSSWRQAYTNSGYSQSLTSPEHMCKACGGQFDTIARKHVC
VDCKKNFCGHCSVQLEPPRPRLCHTCQHFHGTLFDRAQLMRLKVRELRDYLHLHEVPTQT
CREKEELVELVLGQQTPSTSSETVSSQPRAHNNVPSPGTPSPPQTQGPTSPDTLRPEQSA
PEAEPESEQISDDEEEDDEEEEDEGEESDNEETLIPGRRASLSDLSCVEDIEGLSVRQLK
EILARNFVNYKGCCEKWELMERVTRLYNNQKDLQNQDPAAPKSQEENLCRICMDSPIDCV
LLECGHMVTCSKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtggacatcctgttgtagctggttttgtttagaacccaccgccacagtggaagaaaac
gtcagctcctggcgccaggcctacacaaactcgggctacagccaatccctgacctctccc
gaacatatgtgcaaggcctgcggaggccaattcgacaccatcgcgaggaagcatgtctgc
gtggactgcaagaagaacttctgcggccactgctctgtgcagctggagccgccgcgcccg
cgcctctgccacacatgtcagcactttcacggaaccctattcgaccgcgcccagttgatg
cgactcaaggtgcgggagctgcgcgactacctccacctgcatgaggtgcccacccagacg
tgccgggaaaaggaggagctggttgagctggtcttgggccagcagacccccagcaccagc
agtgagaccgtgtcctcccagcccagggctcacaacaacgtcccttccccaggcacacca
tcccctccccagacacagggccctaccagccccgacacattgaggccagaacaatcagcc
cctgaggcagagccagagtcagagcagatatctgatgatgaggaggaggatgatgaagaa
gaggaggacgaaggtgaagagtcagacaacgaggagaccctgatccccggccgaagggcc
tctctgtctgacctgagctgcgttgaggacatcgagggcctgagcgtgcgccagctgaag
gagatcttggcccgcaactttgtcaactacaagggctgctgcgagaagtgggagctgatg
gagagggtcacccgcctctacaacaaccagaaggacctccagaaccaagaccctgcggct
cccaagagccaggaggagaacctctgtcggatctgcatggactctcccattgactgtgtt
ctgctggagtgcggccacatggtcacctgcagcaagtgcggcaaacgcatgagcgagtgc
cccatctgtaggcagtacgtggtacgggcggtgcatgtcttcaggtcctga
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