Oncorhynchus tshawytscha (Chinook salmon): 112228506
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Entry
112228506 CDS
T05605
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112228506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228506
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112228506
Protein recycling
Rab4 associated proteins
112228506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
Fez1
Cep57_MT_bd
Fib_succ_major
CrmD_SECRET
Motif
Other DBs
NCBI-GeneID:
112228506
NCBI-ProteinID:
XP_024249646
LinkDB
All DBs
Position
LG30:25983962..26004525
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AA seq
855 aa
AA seq
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MADQASGSARQPQHDAVLQQRVAALEQERAEFVKRKQQLESEFNQKRAKFKELYLSKEEE
LKCQAASLEGAQSELSRVQAQLEQAQADMENIKAVATVSESTKQEAIDQVKGQWQEEVAS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREVVEREMGELRHRLSEGGQEEENLENDMK
KAQEDAEKLRSVVMPMEQEIAALKVKLTVAEDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLTSEQLRQVEEIKKRDQEEDEKERISQAKEQNEEDRTETEPLEDSFLGLSI
EEPHSAHGSMHSLDSDLVAGGPMDLYKDGLRRVQSTDSLGSSPGLQGLGGYNHKAKSASH
LDESDFGPLVGADCGAPEGLAGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEETA
SLMSSISHAHDTTFLTPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVIQ
GQEAETRDQVKKLQVMLRQANDQLERTMSEKQELEDSVKQGNEETTAKVAALMHRVQESE
SLLKTLQEAFSQAKRNTQEQMAVLMQSREQVAEELSRLQRDNDSLTGKHRLHLSLQQQED
FKLPTMVQELQSLVLQLREDIVVVRTAADHLEEKLKAEILFLKEQLQAEQCLKENLEDTL
QLEIDGCKEEIASLSSLKTELERVKAEKEQLESSLAEKRKTLVSVQGLKSSLEEQLRELT
TTKTALEAQALDEKDKALRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLDRIRAI
LNNTNLTDISQLPET
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggcctcgggatccgcccggcagccccagcatgacgcggtgctccagcag
cgagtggcagccctggagcaggagagagctgagtttgtcaagcgcaaacagcaactggag
tctgagttcaaccagaaacgggccaagttcaaagagctctacctgtccaaagaagaggaa
ctgaagtgccaggcagcgtctctggagggggcccagtcggagctgagtcgtgtacaggcc
cagctggaacaggcccaagctgacatggagaacatcaaggcggtggccactgtgtcagag
agcaccaagcaggaggccattgaccaggtcaagggacagtggcaggaggaggtggcctcc
ctacaggccatcatgaaagacacagtgcgtgagtatgaggtgcagttccaccagcgcctt
gagcaggagcgtgcccaatggaaccagtacagggaggtggtggagagggagatgggcgag
ctgagacaccgcctctctgagggcggccaggaggaggagaacctggagaacgacatgaag
aaggcccaggaagatgcagagaagctacggtcagtggtaatgcctatggaacaggagata
gcagctctgaaagtcaaactgactgtggcagaggacagggtgaaggagctggaagcctcg
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcctgccgcacagacctggag
atgtacgtggcggtgctcaacactcagaagtcagtccttcaggaggacgcagagaaacta
cgaaaagagctccacgaagtgtgtcacctcttggagctggagcggcagcagcacaaccag
ctgaagcacacttggcagcgggccaacgaccagttcctggagtcacagaggctgctgatg
agggacatgcagaggatcgagaacgtgctcacttctgagcagctccggcaggtggaagag
attaagaagagggaccaggaggaggatgagaaggaaaggatcagccaggccaaggagcag
aacgaggaagacaggacagaaaccgaacctttagaagactcattccttgggctcagtatt
gaagagccccacagtgcccacggctccatgcactccttagactctgacctggtggcaggg
ggccctatggacctctataaagacggccttcggagggtccagtccacagacagcctgggt
tcctctcctggtctccagggcctggggggctacaaccataaggccaagtcggccagccac
ctagatgagtccgacttcggacccctggtgggggcggactgcggggcccccgagggcctg
gcgggctttggggacacgctatcggtcagctccatccagctgacggccggccacttcctg
ctcaccaaggaccaggagaaggctataaaggccatgacgccggagcaggaggagacggcc
tcgctgatgtccagcatctcccacgcccacgacaccaccttcctgaccccgtcaggctac
cgcctggtcagtgaccaggagtggaacctgcttcagcaagaggtgaagaacgcaggaagg
aagttgggacggcgatgtgacatgtgctctaactacgaaaaacagctgcaggtcatccag
ggccaggaggcagagacacgcgatcaggtaaagaagctccaggtgatgctgcggcaggcc
aacgaccagctagagagaaccatgagtgaaaaacaggagttggaggactctgtgaaacag
ggcaacgaggaaactactgcaaaggtcgctgctctcatgcacagagtccaggagtccgag
tcactgcttaaaacactacaagaggccttcagtcaggccaagcggaacacacaggaacag
atggctgtgctgatgcagtccagggagcaggttgcggaggaactgagtagactgcagagg
gacaacgacagcctaacaggcaaacaccgactccacttatctctccagcagcaggaggac
ttcaaactacccaccatggtgcaagaactacaatccctggtgctgcagttgcgggaggac
atagttgtggtgcgcacggctgcagaccacctggaagagaagctgaaggcggagatcctg
ttcctgaaggagcagctccaggcagagcagtgcctcaaagagaacctggaggacacacta
cagctggagatagatggctgcaaggaggagatagcgtcgttatccagtctgaaaactgag
ctggagcgagtgaaagctgagaaagaacagctggagagcagcctggcagaaaagaggaag
acattagtgagtgtccagggcctgaagagcagtctggaggagcagctcagagagctcacc
acaaccaagacggccctggaggctcaggcattggatgagaaggacaaagccctgcggttg
cagacggagctggatgttagtgagcaggtgcagagggactttgtcaagctctcccagaca
ctccaggtccagttggagcggatcagacaggctgactctttagaccgtatccgagccatc
ctcaacaacaccaacttgactgacatcagccagctcccagagacatga
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