Oncorhynchus tshawytscha (Chinook salmon): 112228512
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Entry
112228512 CDS
T05605
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112228512 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
112228512 (lrwd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
WD40
Beta-prop_EML_2
LRR_9
LRR_8
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
REV
LRR_14
LRR_At5g56370
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
112228512
NCBI-ProteinID:
XP_024249660
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All DBs
Position
LG30:complement(25770830..25781827)
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AA seq
737 aa
AA seq
DB search
MGKITEKLLLERCTPKNTKLEQVKTLNLSKLGLKSSDLPVPLLSRLRCLEQLDLSGNRLQ
EMPSGLVLPSLRSLDLTNNEMEDVTTLDTLTTLEDLRMEDNLYITVNDNYKLIILLPMLR
FYNGKDISNTANHVRYANSENLRKRVLALWETSFSLPDHRTAEKLAIVERDFVSAVRHKV
KYGPSSLTDYTKWRVEMIAKEHLRSLTEPNEEHRDTEEPADTKENCNFPFPAKRKRSASA
VKCDVTLNPQKIARSSRLQSIPHKAERPISTTPRTHKAAQIPATPIRGQSKLLVTPRNGL
REKQHQSKEDMPLAKRTRKSARQQRSTEVHEMPGKVICTKSQHSSQEPVSLQPLHVLQCH
SKQDSPDDFSTQLWACSFQPPLDYNGDVNGATRIVATCGGESVCLIDCETGLVMKKYKVP
GEEFFSLAWSTVLMSRKGNVGMRPCSILAAGGKRGLVKLLHPRANMAYGEFRASRKALSI
LCFSPRQGNLLFTGSYDKNILLWDIGGVDSDYNFKVTQLLVLETTSTPLHFCLPPATPDT
HLLAACEKGLHSYNIQLNKDPKKRSEEMEITFPVYDKDHDYHTIDGLGFLTNDVVASKSH
MQGSIYLWSWNDTRAQRPNKKKKKKEVCAVILVELQWSSTDIPYLSLNTCPSKGYVVCGD
ERGRLWTYHVTDLKANFRSGKAIPATEILAWPLPVRNGQGPVEGPPINSVAMDPELRYLV
ALSDKNMAVVWIRTESS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaataacagagaaactactgctggagagatgcactccaaaaaacaccaaactg
gaacaagtaaagacactaaatctctccaagctcggtctgaagagcagtgacctgcctgtc
cccctgctttctcgccttcgctgtctggaacagttggacctgtctgggaacagacttcag
gagatgccctccgggctagtcctgccctccctacgctctctggacctgaccaacaatgag
atggaagatgtcaccactctggacacactgaccaccctggaggatctgaggatggaggac
aacctctacatcactgtcaatgacaactacaagctgataatcctcctgcccatgttgagg
ttttacaatgggaaggatatcagcaatacagccaaccatgtacgctatgccaacagtgag
aacctcaggaagagggtattagcgctgtgggagaccagcttttcactccctgaccaccga
acagcagagaaactagccattgtggagagggattttgtcagtgcggtgcgtcataaggtg
aaatatggccccagctctctgaccgactacacaaaatggagggtggagatgatagctaaa
gagcaccttcgctctttgaccgagccaaatgaagagcacagagatacagaggagcctgct
gatacaaaggagaactgtaattttcctttcccagccaagaggaagcgttccgcctcggct
gtcaaatgcgacgtaaccctaaaccctcagaaaatagccaggtcaagccgtctgcaaagc
atccctcataaggcagagcggcccatcagcaccacgccaaggacccataaggcagcacag
atcccagccacccccattaggggccagtccaaactcctggtgacccccaggaacggcctg
agagagaagcaacatcagtccaaagaagacatgccactggccaaacggactcgcaagtct
gccaggcaacagcggtccacagaggtccacgagatgcctgggaaagtaatctgcaccaag
tctcagcattcatcacaggagccagtgagtctgcagcctcttcacgtcctgcagtgtcac
agtaaacaggacagccctgatgactttagcacccagctgtgggcctgttccttccagccc
ccgctagactacaatggagatgtgaatggtgcgactcgtattgtggcaacgtgtggagga
gagtctgtgtgcctgatcgactgtgagactggactggttatgaagaagtataaggtccct
ggtgaggagttcttctctctggcatggtcaactgtactgatgtcacggaagggcaacgtt
ggcatgcggccctgcagtatcttggcggcaggggggaagcgaggcttggtgaaactgctt
caccccagagccaacatggcgtacggagagttcagagccagccgcaaagccctctccatc
ctctgcttcagtccccgccagggcaacttgctcttcactgggtcgtacgataaaaatata
ttattgtgggacattggcggagtggacagcgactacaatttcaaagtcactcagctgttg
gtgttggagaccacctccacacccctgcacttctgcctaccccctgccaccccagacaca
cacctcctcgctgcctgtgagaaggggctgcacagctataacatccagctcaacaaagac
cccaagaaaaggtctgaggagatggagatcacattccctgtgtatgacaaggaccatgac
taccacaccattgatggcttgggattcctcacaaacgatgtcgtcgcctctaagagccac
atgcagggctcgatctacctgtggagctggaacgacacgcgagcccagcggcccaataag
aagaagaagaagaaggaggtatgtgctgtgatcctggtggagctgcagtggtccagcacg
gacatcccctacctgtccctcaacacctgccccagtaaaggctatgtggtgtgtggtgac
gaaagagggagactgtggacgtaccatgtaacagacctcaaggccaactttaggagtggc
aaagcaattcctgccacagagatcctggcttggccgttacctgtgaggaatggacagggc
ccagtggaaggtccccctatcaacagtgtggccatggaccctgagctcagatacctggtg
gccctcagcgacaagaacatggcagtggtgtggataagaacggagtcttcctga
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