Oncorhynchus tshawytscha (Chinook salmon): 112228548
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Entry
112228548 CDS
T05605
Symbol
rars1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112228548 (rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112228548 (rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112228548 (rars1)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112228548 (rars1)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
112228548 (rars1)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112228548 (rars1)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112228548 (rars1)
Prokaryotic type
Other AARSs
112228548 (rars1)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112228548 (rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
ADIP
tRNA-synt_1
COG2
tRNA-synt_1g
YabA
Cnn_1N
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
112228548
NCBI-ProteinID:
XP_024249724
LinkDB
All DBs
Position
LG30:complement(24134041..24166942)
Genome browser
AA seq
660 aa
AA seq
DB search
MGDPVAEYSSRLQQQEQEIHSLTAEIESLKNPQSLGLSSHLDGLREENAKLKYRLNILKR
SLQEERSQCSKTMMNINQRLQEIFGEAIREAWPDLENPPLAVTPNQQAKFGDYQCNSAMA
MAQMMKSKGLKVNPREIAEKIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLL
NGVQPPPLESKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSK
DPAFIKGWNLICDVSRNEFQKVYNCLDIQIIERGESFYQEKMIAVVKEFEAKGLVEMDEG
RKIVFAPGQQIPLTVVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTDSGQGTHFQVVF
AAAQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEK
DRDKVLSTEELTKAQHSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANIDEVALRKAAETTDVLLQHDKEWKLGKCLIRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcctgtggctgaatactcgtcccgacttcaacagcaggagcaggagatccat
tccctgactgctgagatcgagagcctgaagaacccacagagcctgggcttgtcctcacac
ctggatgggctgagagaggagaacgccaagctcaaataccgcctcaacatcctcaaaagg
agtctgcaggaagagaggagccagtgcagtaagaccatgatgaacatcaaccagcgtctt
caggagatctttggtgaggccatccgggaggcctggcctgacctggagaaccctcccctg
gccgtcacccccaaccagcaggccaaatttggggactaccagtgtaacagcgctatggcc
atggcccagatgatgaaatcaaagggcctgaaagtgaaccccagggagatcgctgagaag
attcagcagaacattccagacaatgagctcattgagaagactgaaattgctggaccaggg
ttcatcaatgttcaccttaagagatcgtttgtgtccaaactgctgaccaacctgctactc
aacggtgtccaacctccccccttagagagcaagaagaaggtggttgtggatttctcatct
ccaaacattgccaaggagatgcacgtcggtcacctgcgctccaccatcatcggggacagc
atgtgtcgcctgtttgagttcctaggctatgacgtgttgaggctgaatcatgtgggggac
tggggcacccagtttggcatgctcatcgctcacctgcaggacaagttcccaaactacctg
accgtgtcccctcccattggagatctgcaggccttctacaaagagtccaagaagcgtttt
gacgaggaggaagactttaagaagagggcctaccagtgtgtggtcaagctgcagagcaaa
gacccagccttcatcaaaggatggaacctcatctgtgacgtttccaggaatgaattccag
aaggtctacaactgtctggacatccagatcatcgagagaggagagtccttctatcaggag
aaaatgatcgccgtggtcaaagagtttgaggccaaaggcctggtggagatggacgaggga
cgtaagatagtgtttgccccgggccaacagatccccctgacggtggtgaagtctgatggg
ggctacacatacgacacttcagacctggccgccctgcgccagcggctctttgacgagaag
gcagacatcatcatctacgtgacggacagcggccagggcacccacttccaggtggtgttt
gcagcggctcagatgattggctggtacgaccccaaggtgacacgagtggagcatgctggc
tttggagtggtgctgggagaggataagaagaagtttaagactcgttctggggacacggtg
aggctgatggacctgctggacgaaggcctgaagaggtccatggacaaactcaaggagaaa
gacagagacaaggtgctgagcacagaggagctgaccaaggcccagcactcggtggcgttc
ggctgcatcaagtacgccgacctgtcccacaaccgcatcaacgactacgtgttctccttc
gacaagatgctggatgaccggggcaacacggccgcctacctgctctacgccttcacccgc
atcaggtccatagcccggctggctaacatcgacgaggttgcgctccgtaaagcagcagag
accacggatgtgctcctgcagcacgacaaggagtggaagctgggcaagtgtctcattcgc
ttccctgagatcctgcagaagatcctggatgacctcctgctccacacgctgtgtgactac
ctgtacgagctggccaccaccttcacagaattctacgacagctgctactgcatcgagaag
gaccgccagaccggtgaggtggtgaaagtgaatatgtggagaatgctcctgtgtgacgcc
actgccgccatcatggctaaaggcttcgacatcctgggcatcaacccggtctccaggatg
tga
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