Oncorhynchus tshawytscha (Chinook salmon): 112228572
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Entry
112228572 CDS
T05605
Name
(RefSeq) active breakpoint cluster region-related protein isoform X1
KO
K20629
active breakpoint cluster region-related protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228572
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112228572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
RhoGEF
Bcr-Abl_Oligo
C2
PH_19
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
112228572
NCBI-ProteinID:
XP_042165055
LinkDB
All DBs
Position
LG30:22189553..22449786
Genome browser
AA seq
1156 aa
AA seq
DB search
MRQKQQYKQYNFLKGGYIESLIFAGEIMWEQDEFEKHWKNEFPYGEAPKMDLTSVEDVES
ELEKCKSNLKTLQQALLEEKFKVIYFQTTIARQKKSYDTVMWEDGKDENLNLEHLLPRTE
TERKSLMTNEKLDRECMKVLGNGSMKLQTPGSRGTKPEPPIRISSRTSKPIPPAPPRKSS
FQKQVNTISSELSQADGNCIGRIGKLNSLSESNSREASDHEYEDAELNENFVKGNMVTPN
TTVRDSQRSNTHRDTLRPLRHSRDFDSSDDGRLSPSCIPAHFRASRTGGSGRSTPDRRSD
GNLSSDHEDSSSDFNYNTDGYDGDAAEDHKSQDGSETMPFIDESPTMSPSLCARGPDGEA
ISPIPPEGLLPGGDIEKGLEMKKLVLSGFLASEEIYINQLEALLLPMRPLKATATTSQPV
LTIQQVETIFYKIQDIFEIHKEFYDSLLPHIQQWDEKVAVGHLFKKLASQLGVYKAFVDN
YKTAVETAEKCSQANTQFQKISENLKVKGPKDSKDCTTNVTMEALLYKPIDRVTRSTLVL
HDLLKHTPKDHPDFPLLQDALRISQNFLSSINEEIDPRRTAITTPKGEARQLVKDGFLVE
MSEGSRKLRHVFLFTDLLLCAKMKKTSAGRQQQYECKWYIPLADLTFQLLDDSDVCPHIQ
VLPEHEIEEIKIKISVIKSDIQKEKKALKGQSRNVERLRKKMNEQESWLLLHSPTIPFRI
HNKHGKSYLFLLSSDYERSEWRESIQKLQKKDLQTCQLSSVELQVLTSSCCKLRTVHNIP
VTSNKDDEETSGLYGFLHVIVHSAKGFKESANLYCTLEVDSYGYFVSKAKTRVFRDTTEP
QWNEEFEIELEGSQCLRILCYEKCYDKTKLNKDDNEIVDIIMGKGQVQLDPQTVQSKNWH
VDVIEMNGIKVEFSMKFTSRDLSLKRTPSKKQSGVFGVKISVVTKRERSKVPYIVRQCIE
EVEKRGIDEVGIYRISGVATDIQALKAAFDTNSKDILVMLSDMDINAIAGTLKLYFRELP
EPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLITFLSLLEHLKRVADKEPIN
KMSLHNLGTVFGPTLLRPSESEVTKGHITLASDIWSHDVMAQVSVTWVQVLLYYLQHPPI
SFAELKRNTLYFSTDV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagaaacaacaatataaacagtataatttcctcaagggtggttacatcgaatcg
ctgatcttcgcgggggagataatgtgggagcaagatgaattcgaaaaacattggaagaat
gaatttccttacggagaagcacctaaaatggatttaacctcggtggaagatgtcgagtca
gagctggagaaatgtaaatcgaacctcaaaacgctgcagcaggcgctgttggaggagaaa
ttcaaggtgatatatttccagaccaccatcgctcgacagaagaaaagttatgacacggtg
atgtgggaagacggtaaagacgaaaacttgaatcttgaacatttattaccaaggacagaa
acggaaagaaaatcgctgatgacaaacgaaaagctagacagggaatgtatgaaagttctt
ggtaatggaagcatgaaactgcagacaccaggcagcagaggtaccaaaccagagccgccg
atcaggatcagtagcaggacaagtaaacctataccccccgcgcccccgcgcaagtccagc
ttccagaaacaagtgaatacgatctcatccgagctctctcaagcggatggaaactgcatc
ggccgcatagggaaattgaattccttgagcgaaagcaacagcagagaggccagtgaccac
gaatacgaggatgcggagctcaatgagaatttcgtaaagggcaacatggtgacccccaac
acgaccgtcagagacagccagaggtcgaacacccaccgggacaccctgcgcccgttgcgc
cacagcagggactttgactccagtgatgatgggaggttgtctccttcctgcattcctgcg
cacttcagggcatcccgtaccggtgggtccgggcgcagcactccagacagacgcagtgat
ggcaacttgagttccgaccatgaagactcctcttcagacttcaactataacacagacggg
tatgacggggatgcagcagaggatcataagagtcaggacggttcagagaccatgcccttc
atagatgagtcccccaccatgtccccgagcctgtgtgcccgtggccccgatggagaggcc
atctcccccatccccccagagggcctgctgcccgggggggacatagagaagggtctggag
atgaagaaactggttctgtctggcttcctggccagtgaggagatctacatcaaccagctg
gaggctctactactgcccatgcgccccctgaaggcgacagccaccacgtcccagccggtg
ctgaccatacagcaggtagagaccatcttctataagatccaagacatctttgagatccac
aaggagttctacgactccctcctccctcacatacaacagtgggatgagaaggtcgcagtc
ggacacctctttaagaaactggccagccagctgggggtgtacaaggcctttgttgacaac
tacaagacagcggtggagacagcagagaaatgcagccaggccaacacccagttccagaag
atctctgagaacctgaaagtaaagggacccaaggactctaaggactgtaccacaaatgtc
accatggaagctctcctgtacaagccgattgaccgtgtgaccagaagcacactggttctt
catgacctgctgaagcacacccctaaggaccacccagatttccccctgctgcaggacgct
ctgagaatctcccagaacttcctgtcctccatcaacgaagagatcgacccccgcaggacc
gccatcactacgcctaagggagaggctcgtcagctggtgaaggatggtttcctggtggag
atgtcagagggttccaggaaactgcgtcacgtcttcctctttacagacctactgctctgt
gccaaaatgaagaagacctctgcagggagacaacagcagtatgagtgtaagtggtacatc
cccctggcagacctgaccttccagttgctagatgactcagatgtctgcccccacatccag
gtgctgcctgaacacgagatagaggaaataaagatcaagatctcagtcatcaagagtgac
atccagaaggagaagaaagcgctgaagggccagagtcgtaatgtggagcgtctgaggaag
aagatgaatgagcaggagtcctggctgctgttacactctcccaccatccccttccgcatc
cacaacaaacacggcaagagctacctgttcctcctgtcttcagactatgagaggtcagag
tggagggagagcatccaaaaactacagaagaaagatctgcagacgtgtcagttaagctct
gtagagctgcaggtcctcaccagctcctgctgcaaactccgaactgtccacaacatccct
gtcaccagtaataaagatgatgaggaaacctcaggcctgtatggattcctccatgtgatc
gtccactctgccaaaggcttcaaagagtcagccaatctgtactgtaccctagaggtggac
tcttatggctactttgtcagcaaggccaagacccgcgtcttcagagacaccactgaacca
cagtggaacgaggagtttgaaattgagctggagggttctcagtgccttcggatcctgtgc
tacgagaaatgttacgacaagaccaagctcaacaaagatgacaatgagatcgtggacatc
atcatgggcaagggccaggtgcagctggacccccagacggtgcagtccaagaactggcac
gtggacgtcatagagatgaatgggatcaaggtggagttctccatgaagtttactagtcgg
gacttgagtctgaagagaacgccctccaaaaaacagagtggggtgttcggggtcaaaatc
agtgtggtgacaaagcgtgagcgctccaaggtgccttacatagtccgtcagtgcattgag
gaggtggagaagagggggatcgacgaggtgggaatctacaggatctcaggggtggccact
gacatccaggccctcaaagcagcattcgacaccaatagcaaagacatcctggtgatgttg
agtgacatggacatcaacgccattgcagggactctgaagctgtacttccgtgagctgcca
gagcccctgctcactgaccgcctgtacccagccttcatggagggcatagctctgtcagac
cctgcagccaaggagaactgcatgatgcacctgctgcgctctctgcctgaccctaacctc
attaccttcctcagcctgctggagcatctcaagagagttgctgacaaggagcccattaac
aagatgtccctccacaacctgggcacagtgtttggccccaccctgctcagaccctctgag
tcagaggtcaccaagggacacatcacactggcctctgacatctggtcacatgacgtcatg
gcgcaggtcagtgtgacttgggtccaggtgttgctgtactacctgcagcatcctcccatc
tccttcgctgagctgaagcggaacacactctacttttccactgacgtttaa
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