Oncorhynchus tshawytscha (Chinook salmon): 112228591
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Entry
112228591 CDS
T05605
Symbol
samsn1b
Name
(RefSeq) SAM domain-containing protein SAMSN-1b isoform X1
KO
K23707
SAM domain-containing protein SAMSN-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112228591 (samsn1b)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
112228591 (samsn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_1
SAM_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112228591
NCBI-ProteinID:
XP_042165336
UniProt:
A0AAZ3S6S0
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All DBs
Position
LG30:complement(19462049..19485288)
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AA seq
700 aa
AA seq
DB search
MNLFCFSLEGSTDSLYEPALNKHPVIQEHSCRVPSRHNSRHSSPALRDRAKWRGSDPCIP
TELSEAHKSHLKKKKRRSHVPTTSTSDNETIDNTDTNVYWQSLREKQDFVHIKNNHKEEM
GQGPCQRSVLVVEDRVEQLNSERREKEPTTQGVNFEAWNPNYEPPDSHQQNMTGDAEADM
AESKGKLKRFQRLVKVKKGSQMGLDDGKTDSNCHLADSVFSNDSPVITCIGLGKKTEKKS
SKADPPSPQKQQTKETNGKAVEGPWSTGVHDHHWGLTEFPPPWDVSYHTCHRPPDEPRNY
GFDFTLPRATAWDHFESLVQELDSKQTPPVFSHQRVIRSITDLDISESTRSTSFGRFDSL
RHQPAPVKPEENGGALSAEGEQVNSDQTRSGGIGKKMKAISLTMRKRMGRQYAKALSEEM
CDETERDEEGEGDVVYGVHSFPKGHRKSSHSLESLYSLNSGQSSSSGVTSGSDGSSNRDS
LRLDEELPLSYTGQFCGRARVHTDFVPSPYDTESLKLKVGDVIEIISKPPMGIWTGMLNN
KVGNFKFIYVDLIVEKVPEPPQKMTHRRSRRPRPKTLQELLERLNLEEYASSLLLNGYQT
VDDLRELKEQHLVELNVTDSEHRHRLMAAVECLQEPQSDGQKEGELNKEAKSPTESIKAD
LNCPRDSGCYMPSDCSDNSKEETDIHVPAALNHHPPLAQT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaacctattctgcttctctctggagggctcgacggacagcctgtatgagcctgctctc
aacaaacacccagtcatccaagaacacagttgtagagttcccagtcgacacaacagccga
cacagcagccctgctctgagggacagggctaagtggagaggctcagatccatgtataccc
acagagctgtccgaggctcacaaatcccatttgaaaaagaagaagagaagatcacatgta
ccaacaacgtcaacatcggacaatgaaaccatagataacacagacactaatgtctactgg
cagtcactcagagagaagcaagattttgttcacatcaagaataatcacaaagaagagatg
ggtcaaggtccttgtcagagaagcgtgctggtggtagaggacagagtggagcagctgaac
tctgaaagaagagaaaaagagcccacaactcagggggtgaacttcgaggcctggaaccca
aactatgagcctcctgacagccatcagcagaacatgactggggatgcagaggctgacatg
gctgaatctaagggaaaactgaagaggttccagaggctagtgaaagtgaagaagggaagc
cagatgggactagatgatggaaagactgacagcaattgtcacttggcagactctgtgttc
agtaacgacagtcccgtcatcacctgcatcgggctggggaagaagacagagaagaagtcc
tcgaaggctgacccaccatcgccacagaagcagcagactaaggagaccaatgggaaagct
gtggaaggaccttggagcactggggttcacgaccaccactggggcctcacagaattccct
ccaccctgggatgtctcctaccacacctgtcaccggcccccagacgagccccggaactat
ggctttgacttcaccctgccccgagcaacagcttgggaccactttgagagtctggtccag
gaactggacagcaaacagacgccgccagtgttctcacaccaacgggtcatccgctcgatc
acagatctggacatctcagaatccacgcgctccaccagctttggccgatttgactcactc
agacaccaaccagccccagtgaagccagaggaaaatggaggtgctttgtctgcagaggga
gagcaggttaatagtgaccagaccagatcaggaggtataggcaagaagatgaaggccatc
tcactgacgatgaggaagaggatgggcaggcagtacgctaaagccctgtcagaggaaatg
tgcgacgagacggagagagatgaagaaggagaaggggatgttgtttacggcgtccattca
tttccaaaaggacacagaaagtccagtcactctctggaaagcctctacagtctcaatagt
ggacaaagctcctccagtggggttaccagtggatcagacggctccagtaacagagacagt
ctgaggctggatgaggagctgcccctttcctacacaggccagttctgtggcagagcccgg
gtccacactgactttgtccccagtccctacgatactgaatcactcaaacttaaggtaggg
gatgtgattgagatcatcagcaagcctcctatggggatatggacaggcatgctgaacaac
aaggtgggaaactttaagttcatctacgtagacctcatagtagagaaggttcctgaaccg
cctcagaagatgacacacaggaggagcaggagaccccggcccaaaacgctacaggaactc
ctagagcgcctcaatttggaggagtatgcctcctccctgctccttaatgggtaccagaca
gtagatgacctgagagagctgaaggagcagcatctggtggaactcaatgtgactgattct
gaacacagacatcgtctgatggctgccgtcgagtgcctccaagaaccccaaagtgatggt
cagaaggagggagagttaaacaaggaagccaagtccccaactgagagtattaaagctgac
ctgaactgccccagagactctggctgctacatgccttctgactgctcagacaacagcaag
gaggagacagacatccacgtgccagcagcactgaaccatcatcctcccctggctcagacc
taa
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