Oncorhynchus tshawytscha (Chinook salmon): 112228617
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Entry
112228617 CDS
T05605
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112228617 (siah2l)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112228617 (siah2l)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112228617 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112228617
NCBI-ProteinID:
XP_024249852
UniProt:
A0A8C8IBF7
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All DBs
Position
LG30:complement(18439493..18490146)
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AA seq
316 aa
AA seq
DB search
MSRPSSAGGGGGGLGSGKAGGGKHGGSGGAAASAAAAGVGAVAGSGSALPVAAVALPSAS
LHGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLA
MEKVASTLPFPCKYASAGCLLSLHHSEKPDHEEVCEFRPYTCPCPGASCKWQGSLEAVMP
HLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFF
AVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHL
FADNGNLGINVTISMC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgtcctctgcgggcggtgggggcggaggactcggttccgggaaagcaggc
ggaggaaagcacggcggttcggggggagctgctgcctcagctgcagccgccggagtagga
gctgtggccgggtctggctcggctctacctgtcgctgctgttgccttgccctcagcatcg
ctacatggacaatctgctgaacttacagccttgttcgagtgcccggtttgttttgactac
gttctaccaccgattctgcaatgccaggccggacatcttgtttgcaaccaatgtcgtcaa
aagctgagttgttgtccgacttgtcgcggccctctcaccccgagtatcaggaacttggct
atggaaaaagttgcttctactctaccgtttccttgtaagtatgcgtcagccggatgcctg
ctgtccctccaccacagtgagaagcctgatcacgaggaggtgtgtgaattccgtccctac
acctgcccgtgccccggggcctcctgcaagtggcagggctccctggaggccgtcatgccc
cacctgatgcacgcccacaagtccatcaccaccctgcagggagaggacatcgtcttcctg
gccacagacatcaacctgccgggggctgtggactgggtcatgatgcagtcctgcttcgga
caccacttcatgctggtcctggagaagcaagagaagtacgagggccaccagcagttcttt
gctgtggtgctgctcatcggaacgaggaagcaggccgagaacttcgcctaccgcctggag
ctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatccacgacggc
gtggcggccgccatcatgaacagcgactgtctggtgtttgacacgtccatcgctcacctg
ttcgccgacaacggcaacctggggatcaacgttaccatctccatgtgctga
DBGET
integrated database retrieval system
