Oncorhynchus tshawytscha (Chinook salmon): 112228633
Help
Entry
112228633 CDS
T05605
Name
(RefSeq) phospholipase D2 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00564
Glycerophospholipid metabolism
otw00565
Ether lipid metabolism
otw01100
Metabolic pathways
otw04144
Endocytosis
otw04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112228633
00565 Ether lipid metabolism
112228633
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112228633
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
112228633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228633
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
112228633
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
112228633
Endosome - Golgi transport
Others
Others
112228633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
SelB_WH1
Motif
Other DBs
NCBI-GeneID:
112228633
NCBI-ProteinID:
XP_024249876
LinkDB
All DBs
Position
LG30:17835443..17871144
Genome browser
AA seq
971 aa
AA seq
DB search
MASPAPACCNTPPCPDGGAAVAQKTKHFITDDCELSKEELDGLMREGEESRPFLVVHHLL
DVKEAGVPVLLPGTPVICRVDSTERYTTRSKVRVCTLYTVKLTHGKFTWTVKRKYKHFQE
LHRDLYKHKMMAHFLPLGRFAAQRAQLRAMTEEMPSLHGTERMRRTSSKPKYLEEYLNGL
LENSFCKNYHGMLEFLDVSALSFVSELGPKGLEGSIFKRSGGHRIQGLNCIGHHQFCFRW
SKRWLVVKDSFLLYMNRENGVVCFVLVFDPEFKVQVGRAYTDTKYGVCFQNFTRNLVIKC
NSYRQAHWWSHEINRLAEPCEFLQVQRFGGFAPPRENTLTKWYVNGSGYFADLADALEQA
KEEIFITDWWLSPEVFLKRPATDTYWRLDQILKRKAEQGVKVCVLLYKEVEMALGINSGH
SKRTLMDMHPNIKVMRHPNHMSAVVFLWAHHEKMVAIDQSVAFVGGLDLAFGRWDDSQYR
LTDTETTNHISEEEPKAPLAEPEAADSGDQVDGSDLAQDPKPTEPEEVKEVNHVDLKNNT
QLWLGKDYSNFIRKDWVQLDRPFEDNIDRTEVPRMPWRDLSAALHGKAARDVARHFIQRW
NFAKIFKYKNIRGKFFPCLLPKSHSTADTLPFTVPGSGKASVQVLRSVDRWSAGTCESSI
LNAYIHTIENSEHYIYIENQFFISCADGKNVHNGIGDAIVKRILRAHSEQKKYRVFVVVP
LLPGFEGDISEGGGNAIQAILHFTYRTMCRGEYSILMRLRELENQWSKYITLCGLRTHSQ
ISQSLVTELIYVHSKTLIADDRRYIIGSANINDRSMLGSRDSELALLVEDEERVPSIMGG
EEYQAGPLTLALRKECFRVLLGADSDPKINIDDPISDRFFLLGWNAAAKLNAKIYDKVFR
CLPCNSVHSMRELKEHSGLERLCDTDPEQAKEELEAVRGLLVHFPLNFLSEESLLPPLGS
KEGMAPTGLWT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccagcaccagcatgctgcaatacccctccatgtccagatgggggagcggcg
gtggcccaaaagacaaagcacttcatcacggacgactgtgagctgagcaaggaagagctg
gatggcctcatgagggaaggagaggaaagtcgtcccttcctggtggtccatcatctgctt
gatgtgaaggaggcaggtgtgcctgtgttactgcctgggactccagtcatctgcagagtg
gacagcaccgagagatacactacgcgctccaaggtccgtgtgtgcactctgtacactgtg
aagctgacccatggcaagttcacctggacggttaaaaggaagtacaagcacttccaggag
ctgcaccgtgacctctacaagcacaagatgatggcccacttcctgcctctgggaagattt
gcagcccagagagcacaactgagggctatgacagaggagatgccaagtctacacgggacc
gagaggatgagacgaacttccagcaaaccgaaataccttgaggaatacctaaacggcctt
ctggagaattccttttgtaagaactatcacggcatgctggaattccttgatgtcagtgct
ctctcctttgtcagtgagcttggacccaaaggcctggagggttccatcttcaaaaggtca
ggaggtcaccgtatccaggggttgaactgtattggtcatcaccagttctgctttcgctgg
tcaaagcgctggctggtggtcaaggactccttcctgctctatatgaaccgggaaaatggg
gtcgtctgcttcgtactggtctttgacccggagttcaaagttcaagtgggtcgtgcatat
actgacaccaagtatggggtttgctttcagaacttcaccaggaatctggtcatcaaatgt
aacagctacagacaggctcactggtggagccatgagatcaataggctggctgagccctgt
gaattcctccaggtccaacgctttgggggctttgccccgccacgggagaacacactcacc
aaatggtatgtaaatggaagtggctactttgcagacctggctgatgctctggagcaggcc
aaggaggagatcttcatcacagactggtggctcagcccagaggttttcctgaagaggcca
gctacagacacatactggcgcctggaccagatcctcaaacgcaaagcagaacaaggtgtc
aaagtatgtgtgctcctgtacaaggaggtggaaatggccctgggcatcaacagtggccac
agcaagaggacactgatggacatgcaccccaacatcaaggtgatgcgacaccccaaccac
atgtccgcggtggtgtttctgtgggcccatcatgagaagatggtggccattgaccaatca
gtggcttttgtgggaggcttggacctggcctttgggaggtgggacgacagtcagtaccgg
ttgactgatacggagacaaccaatcatatctctgaagaagaaccaaaggctccactggct
gagccagaagcagctgattcgggtgaccaggtggatggttcagacttggcccaggatcca
aagcctacagagccagaggaggtcaaggaggtcaaccatgtggacctgaagaacaacacc
cagttgtggcttggcaaggactacagcaacttcatcaggaaggactgggtccaactggac
cgcccattcgaagacaacattgaccgcactgaggtgccacgtatgccgtggcgtgacttg
tctgctgcactccacggcaaagctgccagggatgtggcccgccacttcatccagcgctgg
aactttgccaagatctttaagtacaagaacatccgaggcaagttcttcccttgccttctg
cccaagtctcacagtactgctgatacactgccattcactgtgcctggctccgggaaggcc
tctgtgcaggtgttgcgctctgtggatcgctggtcagctggcacttgtgagagctctatc
ctcaatgcctacattcataccatcgagaacagcgaacactacatctacatcgagaaccag
ttcttcatcagctgtgctgacgggaagaacgtgcacaatggcattggtgacgcgattgtg
aagaggatcctacgtgcacacagtgagcagaagaaatacagggtgtttgtggtggtgccc
ctgctgcctgggtttgaaggagacatcagtgagggaggtgggaatgccatccaagctata
ctacacttcacttacaggaccatgtgccgtggagagtactccatactgatgagattgaga
gaacttgagaaccagtggagcaagtacatcaccctgtgtggcctgcgcacgcactcccag
atctcccagtccctggtcacagagctcatctacgtacacagcaagaccctcatagctgat
gaccgccgctacatcatcggctcggccaacatcaatgaccgcagtatgctgggcagccgg
gacagtgagctggctttgctggtggaggatgaggagagggtcccctccataatgggagga
gaggagtaccaggccggacccctcactttggcactgcgcaaagagtgtttcagggtgctt
ttaggagctgattctgaccccaagatcaatatcgatgacccaatcagcgaccgttttttc
ttgttgggatggaacgcggcggcaaaactgaatgctaagatttatgacaaggtcttccgc
tgcctcccctgcaactctgtccacagcatgagggagctgaaggagcattcaggcctggag
cgcctgtgtgacacagaccctgagcaggctaaagaggagctggaggccgtcagggggcta
ctggtccacttccccctcaacttcctgtcagaggagagtctgctccccccactgggcagc
aaagagggcatggctcctacgggactctggacataa
DBGET
integrated database retrieval system
