Oncorhynchus tshawytscha (Chinook salmon): 112228661
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Entry
112228661 CDS
T05605
Name
(RefSeq) glutamate receptor 3 isoform X2
KO
K05199
glutamate receptor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112228661
04082 Neuroactive ligand signaling
112228661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112228661
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112228661
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
112228661
NCBI-ProteinID:
XP_024249943
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Position
LG30:complement(17001119..17106291)
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AA seq
890 aa
AA seq
DB search
MRHRVIAIVFFLLWLFGKSHGAFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEK
PFHLNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDQKSMNTLTSFCGALHTSFITP
SFPADADVQFVIQMRPPLRGAVLSLLAHYKWEKFVYLYDTERGFSILQAIMESAVANNWQ
VTARSVGSIVDPTEYKRIIEEMDRRQEKRFLIDCEVGRINAILDQVVTLGKNSRGYHYIL
ANLVSLQGFANMTLDKVFAGGANITGFQIINPENPIVIQFLQRWERLDEREFPEAKGTPL
KYTSALTHDAVLVLAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQV
QGMTGNIQFDSFGRRANYSIDVYEMKLGGPKKTGYWNEYEKYVFIVDAQVTNESSSVENR
TIVVTTIMESPYVMYKRNYLSLEGNDRYEGYCVDLAAEIAKHVGIRYKLSVVADGKYGAR
DPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG
VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDENDEAKDPQSPPDPPNDFG
IFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSP
IESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPEGVAR
VRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLK
LSEQGILDKLKNKWWYDKGECGTKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMTVALI
EFCYKSRAETKRLKLAKNAQNFKPAPPANTQNFATYREGYNVYGTESVKI
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgcgtaatagccattgtcttttttttgttgtggctttttgggaaatcgcat
ggagcgtttccaaaccagataaatataggtggtctctttatgcgctctacagtgcaggag
cacagcgctttcagattcgctgtccagctgtataataccaatcaaaatgtgacggaaaaa
cctttccatctcaattacaatgtagacaatctcgaatcctcgaacagcttctccgtcaca
catgctttctgctcccagttctccagaggagtgtacgccatcttcggcttctacgaccag
aagtccatgaacacgctgacctcgttctgtggggctctgcacacctccttcatcacaccc
agcttccccgccgatgccgacgtgcagtttgtcatccagatgaggcctcctctacgggga
gctgtcctcagcctgctggcccactacaagtgggagaagtttgtctacctctatgacacc
gagaggggtttctctatcctccaggccatcatggagtcagcggtggccaataactggcag
gttacggcccggtcggtgggcagcatagtggaccctacagagtacaaacgcatcatagag
gagatggaccgtaggcaggagaaacgcttcctcatcgactgtgaagtgggcagaatcaat
gccatcctggaccaggtagtaaccctggggaagaacagcagaggctaccactacatcctg
gctaacctggtttcactgcagggcttcgctaacatgaccctggacaaggtgtttgctgga
ggagccaatataacaggcttccagatcatcaacccagagaacccaattgtcatacaattc
ctccagcgctgggaacgcctagacgagagggagtttcctgaggctaaggggactccactg
aagtacacgtcagcgctgacccatgacgccgtgctggtcctggcagaggccttccggtac
ctgcggaggcagagggtggacgtgtcccggagggggagcgctggggactgcctggccaac
ccagccgtaccttggagccaaggcattgacatagagagagcactcaaaatggtccaggta
caaggtatgacagggaatatccagtttgactcgttcggtcggagagccaactacagcatc
gatgtgtatgagatgaaactaggggggcccaagaagaccggatactggaatgaatacgaa
aaatatgtatttattgtggatgcgcaggtcaccaacgagtcctcttctgtggaaaaccga
acgattgtggtcactactattatggagtctccttatgtgatgtacaagcgaaactacttg
tcgctggaggggaatgacagatatgaaggctactgtgtcgatttagctgctgaaattgca
aaacatgtggggataagatacaaactgtcagtagttgcggacgggaagtatggtgcaagg
gatccagagaccaagacgtggaacgggatggtgggtgaactggtatatgggagagccgat
atagcagtggctcctctaactataacattggtacgagaggaggtgatagacttctctaag
ccttttatgagcctggggatctccattatgataaagaagcctcaaaagtcaaagccgggt
gtgttctccttcctggacccgctggcctatgagatctggatgtgtatagtgtttgcctat
atcggcgtgagcgtggtgctcttcctggtcagccgcttcagcccctatgagtggcatctg
gacgaaaacgacgaggccaaagacccccagagccctccagacccacctaacgactttggg
atttttaatagcctgtggttctccctgggcgccttcatgcagcaaggatgcgatatctcg
ccaaggtctctgtcgggcaggatcgtggggggtgtttggtggttctttaccctcatcatc
atctcctcctacacggccaacctggctgccttcctcacagtggagaggatggtgtctccc
atagagagtgctgaggacctggccaagcagacagagattgcctacgggaccctagactca
ggctccactaaggagttctttaggcgctccaaaatagcagtttatgaaaaaatgtggtct
tacatgaaatcagctgaaccgtcagtgttcgccaagacgacaccagaaggggttgcccga
gtgcgaaagtcgaaaggcaaattcgcctttcttcttgaatccacaatgaacgagtacatt
gagcagcggaaaccttgtgacaccatgaaagtgggcggcaacctcgactctaaaggatac
ggtgtggccacgcctaaaggctcagcattaagaactcctgtaaaccttgccgtattgaaa
ctcagtgaacaaggcatcttagacaagctgaaaaacaaatggtggtacgataagggtgaa
tgtggaaccaaggactctggaagtaaggacaagacaagtgctctaagcctgagcaatgtg
gcgggagtcttctatattctggttggagggctagggctggctatgaccgtggctttgata
gagttctgttataagtcacgggcagaaactaaaagactgaaactggctaagaatgcccaa
aactttaaaccagctcctccggcgaacacccagaattttgccacgtaccgagaaggctat
aatgtgtatggaacagagagtgttaaaatctag
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