Oncorhynchus tshawytscha (Chinook salmon): 112228667
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Entry
112228667 CDS
T05605
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112228667 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228667 (arap1a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112228667 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
112228667 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112228667 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_3
PH_6
PH_8
RA
PH_13
RNR_Alpha
Mcp5_PH
Ras_bdg_2
NICE-1
Motif
Other DBs
NCBI-GeneID:
112228667
NCBI-ProteinID:
XP_024249961
LinkDB
All DBs
Position
LG30:complement(16857407..16874360)
Genome browser
AA seq
1138 aa
AA seq
DB search
MADNENALRAMQNCFHSQFSVDEAEYEDIEENRRTSVEEDSIYLGCTLSQSFNPDIHHSP
VIKMGWLHKTPPQGTLVFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILSVTKVLNVGGQK
FEVVTRNRTFLFRAENNTVREEWVSVLKETIQQHCNSMEKSLMNSSDTCGQRASRVSLIS
KQGYLEMSGLRSKLYVVICADSVFLCRNAEEHSQGVGITSIEMNLGAVKGTDKRSFNLTT
IYRTFSFVAESEQQREQWVEALQACVSHSLSSNAVAQKIWSEEANQRCADCGAPHPDWAS
VNLCVVLCKCCAGVHRGLGQSVSKVRSLKMDENAWTENQLFLLLGNDKVNLFWAANIPPS
EMLCPSSDSEERQRFVTAKYCQGKYRCYHALFGQQEALNKALCNTIQTGDVLETLSLVFC
GADVNCYTGDPELPSPVSVAQHYGQTLQVEFLTHNHNTELPGSRAGDHTILEAALPISHT
GYLFKTASSTRAVTERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVN
PQGKHGYGHSFELYHDSGRVYLFGEDSPDTVREWIKVIGKALVPPVAEDLVGWSFERVGR
LRYTAGQSFHCPCLGWFSLGGSRLLLLLHGEDQVDNIDLRKLQELSMEQEAAAVVLVDRG
RRLRLEGDRRPDYQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDRCISYITQHGLKSE
GIYRRCGVNSKIAALLLSLRHDARQVRLSEGVCQVDNVANVLKRFLREVGEGVFNGHQAS
LPWLHTTTVSERERVSQYKALLHSLPPVNRATLGAVINHLYCVQCFADENQMNMHNLAIV
FGPTLFQTDGTDNSAGQVVEELIQNYQDIFNVNAEQLQRQLDMISHVIKAQEEHAEEGTP
SPLTICGIYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPPQQGDYWSCFLVNDNQE
MERPLHYQERALAIYFSLGKDCHLVVKRNCYMEAMLIYIAAMVDVSRNSMIKFSDEKGQR
GKRTFSRRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVCE
QAERDKQQWYLCCESKNELIKWLATFMNLQVVSFCVTETYSTFLSSLFDFFFSFSFFI
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgagaatgcattgcgggccatgcagaactgtttccacagtcagtttagt
gtggatgaggctgagtacgaggacattgaggaaaacaggaggacatctgttgaggaagac
agtatctatcttggctgcacactgtcacaatccttcaaccctgatattcaccactcacct
gttatcaagatgggctggctgcacaagactccgcctcaggggacccttgttttccagaag
cgttgggtgatgttggatgcacagtaccttcgatactttcaaaatgagaaggaggtctac
tcaaagcggatcatagccatactgtctgtcactaaagtgcttaatgttggaggacagaag
tttgaggtggtgacaaggaacaggactttcttgttccgtgccgagaacaacaccgtcagg
gaggaatgggtgtcagtactgaaagagactattcagcagcattgtaacagcatggagaag
tcccttatgaactccagtgatacgtgtggacagcgtgctagtagagtctcgctcattagt
aagcaaggatacctggagatgagtggactgcgctccaagctctatgtagtcatctgtgcc
gacagtgttttcctctgtaggaacgctgaggagcacagccagggtgttggcatcacctcc
attgagatgaatttgggtgctgtgaagggcacagacaaacggtccttcaacctcaccacc
atctacaggacattcagttttgtggccgagtcggaacagcagagggagcagtgggttgag
gccctgcaggcctgtgtcagtcactctctgtccagcaacgcggtggcccagaagatctgg
tctgaggaggccaaccagcgctgtgcagattgtggcgccccccacccagactgggcctct
gtcaacctgtgtgtggtcctctgcaaatgctgtgcaggggtgcacaggggcctgggccag
agtgtgtccaaagtccgcagtctgaagatggatgaaaatgcgtggactgaaaatcagctg
ttcctgttgctaggtaacgacaaagtaaaccttttctgggcagctaacattccaccaagt
gagatgctctgtccatcaagtgacagtgaggagcgccagcgctttgttactgccaagtac
tgccaggggaaataccgctgctaccatgcactgtttggccaacaggaagccctcaacaag
gctctgtgcaacaccattcagacaggtgatgtattggagactctgtcgctggtgttctgt
ggagcagatgtgaactgttatacaggtgatccagagctgcccagccctgtgtccgtggcc
cagcactatggacagacacttcaggtggagttcctcactcacaaccacaacacagagctc
ccagggtcaagggctggagatcacacaatcttagaggctgctctccccatctcacacact
ggttatctgttcaagactgcctcctcaacacgagcagttacagagcgcaaatctaaagga
gattttagtcgtcgctggtgctcattgaaccaaggtaacttcagctactatgagagtgag
aagagctccagccagagtggacagatgaagatgagtgatgtcctttgtctggtggtcaat
ccccaagggaaacatggttatggtcattcctttgagctgtaccatgactctgggagagtc
tacctgtttggagaggattcccctgacacggtgagggagtggatcaaggtcattggcaag
gccctggtcccccctgtagcagaggacctggtgggctggtcctttgagcgggtgggccgg
ctgcgctacactgcgggccagagcttccattgtccttgcctgggctggttctccctgggg
ggctccagactgctcctcctcctccacggagaagaccaagtggataatatcgacctgcga
aaactacaggagctctccatggagcaagaagctgctgctgtggtgctggtggacagaggc
aggaggctgcgcttggagggggacaggaggcctgactaccagggctggctgagtggcatc
cagcagggcttagggagaggagacggccccctggaccagcagcagcttactgagacagaa
gtccctgtcatcgtggaccgctgcattagctacatcacacagcatggtttgaagtcagag
ggcatctatcggagatgtggtgtgaactctaagatcgccgccctgctgctatctctccgc
catgacgcccgtcaggttcgtctgagtgaaggggtgtgccaggtggataatgtggccaac
gtcctgaagagattcctcagggaagtgggagagggggttttcaatggccatcaggcctct
ctgccatggctccataccactactgtcagtgaaagagagagagtgtcccagtacaaggcc
ctcctccacagcctccccccagtcaacagagccactctgggggctgtcatcaaccacctc
tactgcgttcagtgctttgcagatgagaatcagatgaacatgcacaacctggccattgtg
tttggtcccacgctcttccagacggacggcactgataacagcgcaggacaggtggtagag
gagctcatccagaactaccaggatatcttcaatgtgaatgctgagcagcttcagaggcag
ctggacatgatctctcatgtcatcaaagcacaggaggaacacgctgaggaggggaccccc
tcacctctcaccatctgtgggatttacctggagaggaaggaggagggctctgagctgctg
gttcagatctcccaggcagtgagtgctgaggagctagtgtgtgaggtcctgagacgcggg
aacatccctccacagcagggggactattggagctgcttcctggtcaacgacaaccaggag
atggagcgtccattgcactaccaggaacgagcgctggccatctatttctctctgggtaaa
gactgtcacctggtggtcaagcggaactgctacatggaggccatgttaatctacatagct
gccatggtagacgtgtccagaaacagcatgattaagttcagtgatgagaagggtcaaagg
gggaagagaaccttcagcagacgcctctgtgtactcgatggcacctctctcaggctctac
aaagaagtaaagagtactcagcctgagagggaatgtcaagtccatgctctgaaagtctac
tatggcatcaagaagaggctacagccaccatcatgctgggggatgactgtagtgtgtgag
caggcagaacgagacaaacagcagtggtacctgtgctgtgaatcaaagaacgaattgatc
aagtggctggccacttttatgaacctccaggtagtgtccttttgtgtgactgaaacatat
tctactttcctcagctctttatttgatttctttttttcattttcttttttcatatag
DBGET
integrated database retrieval system
