Oncorhynchus tshawytscha (Chinook salmon): 112228677
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Entry
112228677 CDS
T05605
Name
(RefSeq) unconventional myosin-Ic-like isoform X1
KO
K10356
myosin I
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112228677
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112228677
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228677
03036 Chromosome and associated proteins [BR:
otw03036
]
112228677
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112228677
04147 Exosome [BR:
otw04147
]
112228677
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112228677
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Others
112228677
Others
Actin-binding proteins
Myosins
112228677
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112228677
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112228677
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112228677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_22
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
112228677
NCBI-ProteinID:
XP_024249980
LinkDB
All DBs
Position
LG30:16649967..16684165
Genome browser
AA seq
1048 aa
AA seq
DB search
MSLPPHWKEVGGEGRVHRVMESTLTARDRVGVQDFVLLENYTSEAAFIENLRRRFGEKLI
YTYIGSVLVSVNPYKDLEIYSKAHMERYRGVSFYEISPHIYAVSDNTYRAMRTERRDQCI
LISGESGAGKTEASKKILQYYATTCPVTDHMSTIRDRLLQSNPVLEAFGNAKTLRNDNSS
RFGKYMDVQFDFRGAPIGGHILNYLLEKSRVVHQNHGERNFHIFYQLLEGGEQDQLSKLG
LERNAQKYHYLVKGCCPRVSSINDKSDWKTVRKALTVIGFHEEEVEDLLNIIASVLHLGN
TQFGEGEDGETQITTEPQLTYLSKLLGVDGPALREALTHKKLTAKGEEMIGPLSFEQAVA
ARDALAKAVYGRAFTWLVAKINQSLAFKDEVYNSSKGSSSVIGLLDIYGFEVFQHNSFEQ
FCINYCNEKLQQLFIKLTLKSEQEEYEAEGITWEPVKYFDNKIICDLVEEKHKGFISILD
EECLRPGEPSDISFLEKLEDTLGGHAHFVTHKLANGKTRKAVGREEFRLIHYAGEVNYTV
NGFLDKNTDLLYRNLKEVICQSDNQILSQCFHREEVTTQKRPETAATQFKNSLAKLIEIL
MSKEPSYVRCIKPNDAKQSGRFDEALVRHQVKYLGLMENLRVRRAGFAYRRRYEAFLQRY
KSLCPGTWPNWQGRLADGVATLVQHLGYKPEEYKLGKTKIFIRFPKTLFTTEDALEARRP
ALALTLQTSWRGYRERAKYHRIRNAVLVIQSAWRGMKSRRKARRRRHAAEIIRKFIKGFI
YRHYERCPENEYFLDHQRFSFLMTLVRNPPKSVLDKSWPVPPPSLTEASEHLCRLCMQNM
MRAYCRRIQPEWKKQMEQKVVASQIFQDQKDSYPQSVPKLFVASRLDSEEFNLKVIQTLG
NDKVKYGVAVTKYDRRGYKARPRQLLLTSSFAVLVAEAKLKQRIDYAALRSISVSSLTDG
FMVLHVPSEDNKQKSDVVLQCDHVIEVVTKLATMADKKNKVNISQDSIKFAVARGKEGVI
DFTSGSELKVAKGKKGHLLVTAPQLNPR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccctcctcactggaaggaggtgggaggtgagggcagagttcatagagttatg
gagagtactctgacagcccgggacagggtgggggtgcaggactttgtgctgttggagaac
tacactagcgaggcggccttcattgagaacctgcgtcgacgctttggagagaaactcatc
tatacctacatagggtcagtgttggtatcagtgaacccatacaaggacctggagatctac
tccaaggcgcacatggagcgctaccgaggggtcagcttctacgagatatcaccccacatc
tatgcggtgtcagacaacacgtaccgagccatgcggactgagaggagggaccagtgtatc
ctgatctctggggagagcggagcagggaagaccgaggcctctaagaagatcctccagtac
tatgccactacctgccctgtcactgaccacatgagcacgatccgggaccggctgctgcag
tccaaccctgttcttgaggcctttggtaatgccaaaacattgcgaaacgacaattccagc
cgctttggaaaatacatggatgtccagtttgacttcaggggggcacccataggaggccac
atcctcaactacctactggagaagtctcgtgtggtgcaccagaaccacggagagaggaac
ttccatatcttctaccagctgctggagggaggagaacaagaccagctcagcaagctgggc
ctggagagaaacgctcagaaataccactacctggtcaagggttgctgtcccagggtgagc
tccatcaatgacaagagtgactggaaaacagtgaggaaagccctgaccgtcatcggcttc
catgaagaggaggtggaggatctgttgaatataatcgcaagtgtccttcatcttgggaac
actcagtttggagaaggggaggatggagaaacccagatcaccactgagccacagctcaca
tatctgtccaagctgttgggtgtggatggaccagcactgagagaggctctcactcataag
aaactcactgccaaaggggaagagatgataggcccgttgagttttgagcaggctgtggca
gcccgtgatgccttggccaaagcggtttacggccgtgccttcacctggctggtggcgaag
atcaaccagtctctggctttcaaggatgaagtgtacaacagcagtaagggctcatcatca
gtcataggactgctggatatctacggctttgaggtcttccaacacaatagttttgagcag
ttctgcatcaactactgcaatgagaagctgcagcagctgttcatcaagctcaccctcaag
tctgagcaggaggaatacgaagcagagggcatcacttgggagccggtgaagtactttgac
aacaagatcatctgtgacctggtggaggagaaacacaaaggctttatctccatcctggat
gaggaatgtttgaggccaggggagcccagtgatatctccttcctggagaagcttgaggac
actttgggaggccatgcccattttgtcactcacaaattggcgaatgggaagacacgcaag
gcggtgggcagggaggagttcagactgattcattatgctggagaggtcaactacactgtc
aatgggtttctggacaaaaacaccgacctgctctacagaaacctgaaagaggtcatatgc
cagtcagataaccaaatcctgagtcagtgcttccacagagaggaggtgacgacccaaaaa
cgcccagagacggctgccactcagtttaagaacagcctggccaaactgatagagatcctg
atgtctaaggagccatcctatgtgcgctgtatcaaacccaacgatgccaagcagtcaggg
aggtttgatgaggctctggtcagacaccaggtcaaatatctgggtctgatggagaacctg
agagtcaggagagctggctttgcctaccgccggcgctacgaagccttcctacagaggtac
aagtctctgtgtcccgggacgtggcctaactggcagggcagactggctgatggagttgcc
actctggtccaacacctgggctataaaccagaggaatacaaactgggaaagaccaagatc
ttcatccgtttcccaaagactctgttcaccactgaagatgccttggaggccaggaggccc
gccctcgctctcacactacagacctcctggaggggctacagagagagggccaagtaccac
cgcatcagaaacgcagtgctagtgatccagtctgcctggagagggatgaaatcccgccgt
aaggcaagacgccgcagacacgctgctgaaatcatacgcaagttcatcaagggcttcatc
taccgccactatgagcgctgtccagagaatgagtacttcctggaccatcagcgtttctct
ttcctgatgacgctggttaggaacccacccaagagtgtcctggacaagagctggcccgtt
cccccacctagcctcactgaggcgtcagagcacctgtgcaggctgtgtatgcagaacatg
atgcgggcctactgcaggaggatccagccagagtggaagaaacagatggagcagaaggtg
gtagccagtcagatcttccaggaccagaaggacagctatccccagagtgtccccaagctg
tttgtggcctccagactagacagtgaggagttcaacctcaaagtgatacagactctgggc
aatgacaaagtgaagtatggagttgcggtgactaagtatgataggaggggttacaaggcg
cggccgcgccagctgctcctcacctcctcctttgctgtgctggtggctgaggccaagctg
aagcagaggatcgactacgcggccctgaggagcatctctgtgagttctctgactgatggg
ttcatggttctgcacgtgcccagtgaggataacaagcagaagagtgatgtggtgctccag
tgtgatcatgtgatcgaggtggtgaccaagctggccaccatggcggacaagaagaacaag
gtcaacatcagccaagacagtattaagtttgcggtggctcgggggaaggagggggtcatt
gatttcaccagtggatcagagctgaaggtagccaaaggcaagaaaggacacctgctggtg
acggcccctcaactcaacccaagatga
DBGET
integrated database retrieval system
