Oncorhynchus tshawytscha (Chinook salmon): 112228790
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Entry
112228790 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112228790
04082 Neuroactive ligand signaling
112228790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112228790
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112228790
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Gene cluster
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112228790
NCBI-ProteinID:
XP_024250200
UniProt:
A0AAZ3PVN7
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Position
LG30:9861871..9922911
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AA seq
512 aa
AA seq
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MLGPQEDKLCGMFSALAALSFVCFVQSTSTGQTGISVAKATVDKLLKGYDIRLRPDFGGA
PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYAELPLNLTLDNRVADQLWLP
DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIVFYWHGGDNAVTGVDKLELPQFSIVALRLVSREVRFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKIHERLNKTNNERPRYEEK
RLREQDSIATPFQTNTLRSYTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGS
SVSDSRNSVMSFDSSGVQFRKPMAPRDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPN
LADVSTIDKWSRVLFPIMFGFFNLIYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcctcaagaagataaattatgtggaatgttctctgctttggcggctctgtcc
ttcgtttgctttgttcaaagcacctccactggacaaaccggaatatctgtggccaaggcc
acggtggacaagttgctgaaggggtatgacatccgtctaaggcctgattttggaggtgcc
ccagtcatcgtaggaatgagcatcaacatcgctagcattgactccatctcagaagtgaac
atggattacaccatcacaatgtatttccagcaaagttggcgagacaagcggttggcatac
gctgagctgcccctcaacctgactctggataaccgtgtagcagaccagctgtggctccca
gacacctacttcctcaatgacaagaagtccttcctgcatggcgtgacagtgaagaaccgt
atgattcgactgcatcctgatggcaccgtgttatatgggctcagaataaccaccacagca
gcttgcatgatggatttgaggaggtaccccctcgacgaacagaactgcaccttggaaatc
gaaagctatgggtacaccacagacgacatcgtgttctactggcacggaggggacaatgcg
gtgacgggggtggacaaactggagcttccccagttctccatcgtggcgcttcggctggtg
tccagggaggtcaggtttaccacaggttcctatcccaggctatcactgagtttcaggatt
aagaggaacattggctacttcatcctgcagacatacatgccctccatcctgatcaccatc
ctctcctgggtctccttctggatcaattatgatgcctctgcagctcgggtggcccttggt
gttacaactgtgctcaccatgacaaccattaacacccaccttagggagaccctcccaaag
atcccgtatgtgaaagccatcgacgtctacctcatgggctgttttgtgtttgtgttcctg
gccctgctcgaatatgccttcgtaaactacgtgttctttggccggggaccccagcaacag
aagaaaatccacgagcggctgaacaaaaccaacaatgagcgcccgcgatacgaagagaag
cgcctgagagaacaggactccattgccacgccgtttcaaaccaacaccctcaggtcatat
acacagagaagaaatctgtacctcgaggagcaaagaaaagttggggtggacgcatacggg
aacatcctgctcaccacgctggagatgaataacgaggtgatgccgtcagatgtaggaagt
agcgtcagtgactcccggaattcagtgatgtcattcgacagctccggggtccagttcagg
aagcccatggctccccgggacggcttcagccaccactcactggaccgcagcgctatgcgc
agcagggccaactgtcggctacgacggcgctcctctaagctcaagctgaaaatccccaat
ctggcagatgtcagcaccattgacaaatggtcccgggtccttttccccatcatgtttgga
tttttcaacctaatctactggttgtactatgtgaattga
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