Oncorhynchus tshawytscha (Chinook salmon): 112228805
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Entry
112228805 CDS
T05605
Symbol
lrfn4a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112228805 (lrfn4a)
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112228805 (lrfn4a)
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
SALM family
112228805 (lrfn4a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112228805 (lrfn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
LRR_9
fn3
Ig_2
LRR_14
LRRCT
Motif
Other DBs
NCBI-GeneID:
112228805
NCBI-ProteinID:
XP_024250219
UniProt:
A0A8C8H8Q3
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All DBs
Position
LG30:9280457..9287981
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AA seq
927 aa
AA seq
DB search
MPKSNSQILHPYLAPHHSKYYWKPSKQSSSLKGVHPDRTVPPPKLKPKVTKPSLRPPACP
LTPQTVVWLAVVTGSCVFPALLGPGVSAGETWGMVSICPFHCVCRNLSESLSTLCVNKGL
LFVPPDIDRRTVELRLADNFILEVGRVDFANMSGLVELTLSRNTIHTLRPLSFADLESLR
SLHLDTNRLTIVGPRDLSGLTNLQHLIINNNQLTDVSAEAFDDFLQTLEDLDLSYNNLRK
VPWEAIQNMASLHTLNLDHNLIDQIAEGSFGELYKLARLDMTSNRLQTLPPDPLFSRSQT
GVVSPTPYSAVISLSFGGNPLHCNCELLWLRRLIRGDDMETCATPVHLAGRYFWSIPEEE
FTCEPPLITRHSNKLWVLEGQRATLRCRAIGDPEPIIHWISPDDRIVANSSRVYSYYNGT
LDVLVTRARDDGAYTCIAINAAGEATALIDLKIIPLPHRGNNTVPLTNPRGDPGSSDISS
GRTGGSGRNGKGGGGSVKNATGEGESGERGDGEASTSERLVGVLGVTATSAQVRWVLGRA
TGPYLVWMYQIQYNCTADDALVYRILPPTSSSFLLKNLVSGADYSLCVLAIFDDGVSTLA
TTKVLGCTQFSTKEDFPECRSLQAHFLGGTLTVMVGGVIVVTLLVFTVAMMVRHRVCGDC
RDEGHYPAHHHDDFLPSKEGVDVYAQTNGNGSVMMVALPNNILGQQAKPLPLKTKPQAKN
KPGKLPKPKLDSDQLSGEGKGEKPGLEVVVRGKGFPPFTLESERVTLYYSPSNTSQTLPH
PRAHKAPKHSGKLKLRRTEEKERDLDKMVGSICSIDSEAQGEELERVKDSRRGDRPPLGP
TRSCSFDVGEITTTTCYGYAKRLSVIWTRRSQSVQGMLVQCASTASSASSTGSDHPPPAL
THGYLHTNNTSKSSEADNIGDLEESVL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatccaactcacaaatactacacccatacctggcaccacaccactcaaaatac
tattggaagccttcaaagcaaagctcctctctaaaaggggtccacccagacagaacagta
ccccctcctaaactcaagccaaaggtgaccaaaccttccctgagaccccctgcctgccct
ctgaccccacagacggtagtctggctggccgtggtgactggttcctgtgtcttccctgcg
ctacttggcccaggcgtgtctgctggagagacctggggcatggtctccatctgtcccttc
cactgtgtgtgtcgaaacctctcagagtctctgagcacgctctgcgtcaacaagggcctg
ctgttcgtccctcctgacattgaccggcgcaccgtggagctccgtctggcagataacttc
atcctggaggtgggcagggtggactttgccaacatgtcaggcctggtggaactgactctg
tctaggaacaccatccacaccctgcggcccctgtcctttgctgacctggagagcctgcgc
tcactccacctggacaccaaccggctgaccatagtggggccaagagacctgtccggcctg
accaacctacagcacctcatcatcaacaacaaccagctgaccgacgtctccgccgaggcc
ttcgatgacttcctgcagacgctggaggatctggacctgtcctacaacaacctgaggaag
gtcccctgggaggccatccagaacatggccagcctgcacaccctcaacctggaccacaac
ctcatagaccagatcgctgagggctccttcggcgaactctacaagctggcccgcctggat
atgacatccaaccggctgcagacgctgccccccgaccccttgttctcccgctcccagacg
ggcgtggtcagccccacgccctacagcgctgtcatcagcctgagcttcggggggaacccc
ctgcactgtaactgtgagctgctgtggctgaggcggctgatccgcggcgacgacatggag
acgtgtgccacccccgtccacctggctgggcgctacttttggtccatcccagaggaggag
ttcacctgtgagcctccgctcatcacacgccactccaacaaactgtgggtgctggagggc
cagagggccacgctgaggtgccgtgccatcggtgatcctgagcccatcattcactggatc
tcccctgacgaccgcatcgtggccaactccagccgtgtgtactcctactacaatggcacc
ctggacgtgcttgtgacgcgggcgcgtgacgacggggcttacacctgcatcgccatcaac
gctgccggggaggctacagccctgatagacctcaagatcatccccctccctcaccgcggc
aacaacactgtccccctcaccaaccctcgtggagacccaggctcctcagacatttccagt
gggagaacaggagggtctggaaggaacgggaagggtggtggtggttcggtaaagaacgcc
acaggagagggggagagcggagagaggggggatggagaagccagtaccagtgagcgtttg
gtgggggtcctgggggtgaccgccacctctgcccaggtgcgctgggtcctgggccgggcc
actgggccgtacctggtgtggatgtaccagatccagtacaactgcactgcagatgacgcc
ctggtgtacagaattctgccgcctacaagcagctctttcctgctgaagaacctggtgtct
ggagcagactacagcctgtgtgtcctggccatctttgacgatggggtgtccaccctggcc
accaccaaggtcctaggctgcacccagttcagcaccaaggaggacttcccagagtgccga
tccctgcaggcccacttcctgggcggcacgctgacggtcatggtggggggggtcatcgtg
gtaacactgctggtgttcaccgtggcgatgatggtaaggcaccgtgtctgtggagactgt
cgagacgagggccactaccctgcccatcaccatgacgacttccttccctccaaggaagga
gtggatgtttacgctcagaccaacggaaatgggagcgtgatgatggtggctctgcccaac
aacattcttggtcaacaggctaagccgctgccgttgaaaaccaaaccccaagccaagaac
aagcctgggaaactgcccaagccaaagcttgactcagatcagctcagtggggagggaaaa
ggtgagaagccaggcctggaggtggtcgtgagggggaaaggattcccccctttcaccctt
gagagtgagagagtgacactgtactactccccttccaacacctcccagaccttaccccat
ccccgagctcacaaggccccgaaacactcaggcaagctcaagctgcgccgcactgaggag
aaggagagagacttggacaaaatggtgggctccatatgcagcatagactctgaggcccag
ggggaggagttggagcgcgtgaaggactcgaggaggggagatcgcccgccactagggccg
acacgcagctgctcctttgacgtgggcgagatcaccacgacaacctgctacggatatgcg
aaacgactgagtgtgatatggaccaggaggagccagtcggtgcagggcatgctggtccag
tgtgcctcaacagccagttcagcgagcagcacaggcagcgaccacccccctcctgccctc
acccatggctacctgcacaccaacaacacctctaagtccagtgaggctgacaacatcgga
gacctggaagagagtgttttatag
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