Oncorhynchus tshawytscha (Chinook salmon): 112228820
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Entry
112228820 CDS
T05605
Symbol
esrra
Name
(RefSeq) steroid hormone receptor ERR1 isoform X1
KO
K08552
estrogen-related receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112228820 (esrra)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112228820 (esrra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112228820 (esrra)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112228820 (esrra)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112228820 (esrra)
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3B. Estrogen-related receptor
112228820 (esrra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112228820
NCBI-ProteinID:
XP_024250258
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Position
LG30:8978344..8996721
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AA seq
435 aa
AA seq
DB search
MTMSSRERRSELYIKAEPSSPDGGGGGRASPGGASSDSSQSGGGGNRRDGVGRYSPHLYT
PALRCHFKEEGGDGAEEGSTGSGGGRCKYALSTLPKRLCLVCGDVASGYHYGVASCEACK
AFFKRTIQGNIEYSCPASNECEITKRRRKACQACRFTKCLKVGMLKEGVRLDRVRGGRQK
YKRRPEVESATYQSAALPLRKEGEKGSSSIIVSHLLVAEPEKLFAMPDPLQPDTAQRTLT
TLCDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAFRSLGCEDEVVF
AEDFVLDEEMSRVAGLTELNAAVSQLARRFRSLQLDREEFVMLKAIALTNSDSVYIEDIE
AVQKLRDLLHQTLLELECQRRPEDPQRAGRLLLTLPLLRQTAGRALTTFYSIKTRGGVPM
HKLFLEMLEAMMDSP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtcttccagggagcgtcggtcagaactgtacatcaaggcagagcccagcagt
ccagatggaggtggtgggggccgggccagcccagggggagcctcctcagactcctcccag
agtggtggaggtggaaatagaagagacggggttgggcgctactcaccccatctgtacacc
ccagccctgcgctgccacttcaaggaggagggtggggatggggcagaggagggatccaca
ggtagcggaggagggcggtgcaagtatgccctgagcacgctacctaagagactgtgttta
gtgtgtggagacgtagcctctggctaccactacggtgtagcctcgtgtgaagcctgcaag
gccttcttcaagagaaccatccagggtaacattgaatatagctgtccggcgtcaaacgaa
tgtgagatcaccaagaggcgcagaaaggcttgccaggcgtgccgcttcaccaagtgcctc
aaagtgggcatgctgaaagagggagtccgtctggaccgagtcagaggagggaggcagaag
tataaaagacgtccagaggtggagagcgcaacctatcagagtgcagctttaccgcttagg
aaggaaggggagaaaggatcctccagcatcattgtgtcccacctcctggtggcagagcca
gagaaactgtttgccatgcctgaccccctgcagcctgatacggctcagcgcacactcacc
accctctgtgacctcgccgaccgcgaactggtcgtcatcatcggctgggccaaacacatc
cccggcttcctgtcgctgtccctggcagaccagatgtcggtgctgcagtcggtgtggctg
gaggtgctggtgctgggtgtggccttccgttccctgggctgtgaggatgaggtagtgttc
gctgaggactttgtccttgacgaggagatgtctcgcgtggctggactgacagagctcaac
gcagccgtcagccagctggcccgacgcttccgctccctgcagctggaccgggaggagttt
gtcatgctcaaagccattgcactcaccaactcagactctgtgtacatagaggacatagag
gcggtgcagaagctgagggacctccttcaccagaccctgttggagctagagtgccagcga
cgccccgaggacccccagcgggcggggcgtctcctcctcaccctcccccttctccgccag
acagctggtcgcgccctcaccaccttctacagcatcaagactcgaggcggcgtgcccatg
cacaaactcttcctagagatgctggaagctatgatggactcgccctag
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