Oncorhynchus tshawytscha (Chinook salmon): 112228822
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Entry
112228822 CDS
T05605
Name
(RefSeq) EH domain-containing protein 1
KO
K12483
EH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112228822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228822
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112228822
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112228822
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112228822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EF-hand_4
EHD_N
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_7
Roc
AAA_16
AAA_22
EF-hand_6
PIN_5
EF-hand_5
AAA_28
TsaE
AIG1
Popeye
Motif
Other DBs
NCBI-GeneID:
112228822
NCBI-ProteinID:
XP_024250264
LinkDB
All DBs
Position
LG30:8912134..8931039
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AA seq
528 aa
AA seq
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MFKRNGKKDPELIQNVSEGLKKLYKTKLFPLEDTYHFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGEQDGLIPGNALVVDPKKPFRKL
NAFGNAFLNRFVCAQMPNAVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRSLKNHEDKMRVVLNKADQIGTQQLMRVYGALMWSLGKIVG
TPEVIRVYIGSFWAQPLLVADNRKLFEAEEQDLFKDIQGLPRNAALRKLNDLIKRARLAK
VHAYIISSLKKEMPNMFGKENKKKELIANLGEIYTRIEKEHQISPGDFPKLAKMQEILAN
QDFSKFQAVKPKLLEAVEDMLANDIAKLMTLVRQEEAAMPSQSVQGGAFEGTMDGPFGHG
YGEGAGEGIDELEWVVARDKPTYDEIFYTLSPVNGKVSGALAKKEMVKSKLPNTVLGKIW
KLADVDKDGYLDDDEFALANHLIKVKLEGHELPTDLPEHLIPPSKRGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaggaatggcaagaaggacccagaactaatccaaaatgtgtcggaggggctg
aaaaaactgtacaagaccaaactctttcccttggaagacacctaccacttccacgatttc
cattcaccagctttggaagatgccgactttgacaacaagcctatggtgctcttggttggc
caatactccacgggtaaaaccacatttatccggcatcttatggagcaagattttcccggg
atgcggatagggcccgaaccgaccaccgactccttcatagcggtcatgcatggagagcag
gatgggctgatcccaggcaacgctctagtagttgaccccaaaaaacccttcagaaaactc
aacgcttttggtaacgcctttcttaacaggtttgtgtgtgctcagatgcccaacgctgta
ttggagagcatcagtatcattgacaccccaggaatcctgtctggagaaaagcagaggatc
agcagaggctatgactttgctgcagtgctggagtggtttgcagagcgtgttgaccgcatc
attctgcttttcgacgcccacaagctagacatctcggatgagttctctgaggtgatccgc
tccctgaagaaccatgaggacaagatgcgggtggttctgaacaaggctgatcagattggc
acacagcagctgatgagggtctatggcgccctcatgtggtctcttggtaaaattgtcggt
acgccagaggtgatccgggtgtacattggttctttttgggctcagccgctcctggtcgca
gacaaccggaagctttttgaggcagaggagcaggaccttttcaaggacatccaggggcta
cctcggaatgctgctctgaggaagctcaatgacctcatcaagcgggctcgcctcgccaag
gtccacgcctacatcatcagctctctaaagaaggagatgcccaacatgtttgggaaggag
aataagaagaaggagctgattgctaacctgggggagatctacacgaggattgagaaagag
caccagatctcacccggagacttccctaaactagctaagatgcaggagatcttggctaac
caggacttcagtaagttccaggcagtgaagcccaagctgctggaggctgttgaggacatg
ctagccaatgacatagccaaactcatgacccttgtccgccaggaggaggcagccatgccc
agccagtcagtccagggtggcgcctttgagggcaccatggacgggcctttcggccatggc
tacggcgagggtgcaggcgagggcattgatgagctggagtgggtggtggcacgagacaaa
cccacctacgacgagatcttctacaccctgtctcctgtcaacggcaaagtgtcaggtgcc
ttggccaagaaggaaatggtgaagtccaagctgcctaacacagtgctgggaaagatctgg
aagctggctgacgtagacaaggatggatacctggacgatgacgagtttgcccttgccaat
cacttgatcaaggtgaagcttgaggggcacgagcttcccactgatctgccagaacacctt
atccctccctccaaaaggggactgtag
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