Oncorhynchus tshawytscha (Chinook salmon): 112228829
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Entry
112228829 CDS
T05605
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228829
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
EARP complex
112228829
Endosome - Golgi transport
Tethering complex
GARP complex
112228829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2
EXOC6_Sec15_N
COG5_N
YxiJ
DUF4239
DUF6290
Sec3_C-term
Sec8_N
IFT57
TMTC_DUF1736
Motif
Other DBs
NCBI-GeneID:
112228829
NCBI-ProteinID:
XP_024250270
LinkDB
All DBs
Position
LG30:8844117..8851235
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AA seq
838 aa
AA seq
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MDGDICATATTPPDSDPARKRRVHGMLKLYYGLNEEGKTVDQAESMNPCDINGTHFDPEV
YLNKFRRECSLGELMDQESCMVKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFKKM
EDEMDCLSTNMAAITEFSAHISGTLQDQHAQITKLSGVHNLLRKLQFLFELPARLNKCLE
LQAYSQAVSSHRRARCVLQQYSHMPSFRGIQDDCHAIMDKLAQELRQKFRDGGSSAKDLS
ECVELLLQLDEPAEELCDKFLIHAQSRLETNLRGLEAELRPPLSSGPTSVIDPSIGPARR
LSAAPTAGSPTDPTSPGNPFLSSSSRTDILEFIDRGCNEFVSSLCLVIASYQELFVNRPQ
EGNLASKNIPQMAIGKLHAFVDAMATCYFSLVERRIQEEKSVGDNSLLVRALDRFHRRLQ
AVAKLLPGSAVPSQGTEIVVRAARERIKQYLAALQSFYLDSLRDVRQALAAPRLGGSSAG
GGSHLAGSATGKDAPASLPELLSSLSASILNQIKSVLASVHLFTAKDITFSNKPYFKGEF
CSQGVRESLVVNFIKFVCQSSRQFCESAGDRGGSTPPALLLLLSRLCLDYETSTITYILT
LTDEQFLVQHRSPVTAVAALCGEAREAAQKLLKHYVKVQGLIISQMLRKSVETRDWVNTI
EPRNVRAVMKRVVEDTTSIDVQVSLLYEEGTRKAHSSDSSKRTFSVYSGSRQQTRYAPSY
TPSAAMDTNFLSNIHKLFSERIDIFSPVEFNKVSVVTGIIKISLKTFLECVRLRTFGRYG
LQQIQVDCNYLQMYLWRFVSDENLVHFLLDEIVGSTAHRCLDPAPMEQSVIEVICERG
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatatttgtgctacggccaccacaccacctgactccgacccagcgcggaag
cgccgagtgcacggtatgttgaagctctattatgggttgaacgaggaaggaaagaccgtg
gatcaagcagagtcgatgaatccttgcgatataaacggcacgcatttcgatcctgaggtt
tatctcaataagtttaggagagaatgttcccttggtgagctgatggaccaggagagctgc
atggtgaagcagatccgctccttggacagtgacatgcagacattggtgtatgagaactac
aacaagttcatctctgccacagacacaatcagaaaaatgaagaatgattttaagaagatg
gaggacgaaatggattgtctctctactaacatggctgctatcacagagttcagtgcacac
atcagtgggactcttcaggaccagcatgcacagataaccaaactgtcaggagtccacaac
ctccttcgaaagctgcagttcctgtttgagctgcctgccaggctgaataagtgtctggag
ctgcaggcttattcccaggcggtgagctcccatcgtcgtgcccgctgcgtgctgcagcag
tacagccacatgccctccttcaggggcatccaggatgactgtcatgccatcatggacaag
ctggcacaggagcttaggcagaagttcagagatggaggttcgagtgcgaaggacctttca
gagtgtgtggagcttctgctgcagctggatgagccagcagaggaactgtgtgacaagttc
ctgatccacgcccagtcacgactggaaacaaacctcagaggactggaggcggagctaaga
ccaccattgtcctctggacccacatcagtgatagatccctccattggccctgcccgcaga
ctgtcagctgcacccactgctggatctcccactgaccccacctctccaggcaatcccttc
ctctcttccagctcaaggactgatattctggaattcatagacagaggttgcaatgaattc
gtcagtagcctttgcttggtcattgcctcataccaagagttgtttgtcaaccgtccacaa
gagggtaatctggcctccaaaaacatcccccagatggctattggcaagctgcatgctttc
gtggatgccatggccacctgctacttctcgctggtggagaggaggatacaggaggagaaa
agtgttggagacaactctcttctggtccgggctctggaccgtttccaccgcaggctccag
gccgtggccaaactgctgcctggatctgctgtgcccagccaagggactgagatcgtggtg
cgagcagccagggagaggatcaagcagtacctggcagccctgcagagcttctacctggac
agcctgagagacgtgaggcaggccctagcagcccctcggctgggtggaagctcagctgga
gggggctctcatctggcgggatcagccactgggaaagatgctcccgccagcctgccagag
ctcctctcctctctgtctgcttccattctcaatcagatcaagtcagtgctggcatcagtg
cacctcttcaccgcaaaggacatcaccttctccaataagccttacttcaagggggagttt
tgcagccagggtgtacgtgagagccttgtggttaacttcattaagtttgtgtgccagtcc
tcacgtcagttctgtgagagtgcgggagacaggggcggctctacaccccctgccctcctc
ctgctgctgtcacgcctctgcctggactacgaaacctccaccatcacctacatcctcacc
ctcacagacgagcagttcctcgtgcagcatcgttctcctgtaactgcagtcgcagcttta
tgtggagaggccagagaggcagcacagaagctactgaagcattatgttaaggttcagggc
ctgatcatatcccagatgctgagaaagagtgtggagactcgagactgggtcaacaccatc
gagccacggaacgtccgtgctgtgatgaagagagtggtggaggacaccacctccattgat
gtgcaggtgagtcttctctatgaggaggggacgagaaaagcccacagcagtgactccagc
aaaaggaccttctctgtctacagcggctctaggcagcaaacccgctacgcccccagctac
acacccagtgcagctatggataccaatttcctgagtaatatacacaagctcttctctgag
cggatcgacatcttcagtcctgtggagtttaacaaagtctctgtggtgacagggatcata
aagatcagtctgaagacgttcctggagtgtgtccgtctgcgtacctttggtcgttacggc
ctgcagcagatccaggttgactgcaactacctgcagatgtatctgtggcgcttcgtctcc
gatgaaaacctggtccacttcctactcgacgagatagttggcagcactgcccaccgctgc
ctggaccccgctcccatggagcagagcgtgattgaggtcatctgtgagagaggttaa
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