Oncorhynchus tshawytscha (Chinook salmon): 112228871
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Entry
112228871 CDS
T05605
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03030
DNA replication
otw03410
Base excision repair
otw03420
Nucleotide excision repair
otw03430
Mismatch repair
otw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112228871 (pold3)
03410 Base excision repair
112228871 (pold3)
03420 Nucleotide excision repair
112228871 (pold3)
03430 Mismatch repair
112228871 (pold3)
03440 Homologous recombination
112228871 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112228871 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otw03032
]
112228871 (pold3)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112228871 (pold3)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112228871 (pold3)
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
112228871 (pold3)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
112228871 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
112228871 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
MsyB
Motif
Other DBs
NCBI-GeneID:
112228871
NCBI-ProteinID:
XP_024250351
LinkDB
All DBs
Position
LG30:7404153..7416100
Genome browser
AA seq
448 aa
AA seq
DB search
MDDLYLDNIDEFVNDQNKIVTYKWLSLTLGVHVNLAKQMLYHYLDQKRKEGSARLHATYL
VSGKFVENGTTSHKVSVVREDQLEDAKSKMSLTVSVHVYSVQKAVLKDSGPLYSADYDAV
KENLRNCSRYSAIRCADAVPRSSAEVQLACETTQAPPPETEQIKANHSNLASKPTSKQPK
GIMGMFANKNVSKNQDSSKEIKLEQKEVTPVVETSKTKPAPKTNPVTNFFAKQAAKKPDK
SIKEEVEIAQTSSSVDEKPTSPPPKADTPVKEELAKDAVVEKDTSKTKRLEHSDSEEEKN
ESRRKKRRRIKKPEPDSSDDEVIPDSPPQLQEKRDPSPSPEIQVKKEPVAVSHSDELSDC
KRRKRRRVLKSRTFVDDEGCIVTEKDYESESYSETEDDFKFSQPTPKNPNPPKPSTGKKE
EEKKSKKAAAASNKSTKQASIMGFFQKK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctttacttggataatattgatgaatttgtcaacgaccagaataaaatcgtg
acctacaaatggctgagtctcacccttggggtccatgtcaacctagccaaacaaatgctc
taccattacttggatcaaaagaggaaagaaggctctgctcggctccatgctacctacctt
gtgtctggcaagtttgttgagaatggtaccacgagtcacaaggtgtcagtagtgcgagag
gatcagctggaggatgcgaagtcaaagatgagcctgacggtcagcgtacatgtgtacagt
gttcagaaggctgtgctgaaagacagtggtcctctgtacagtgctgattatgacgctgtg
aaagagaatctaagaaattgcagcaggtacagtgcaattcgttgtgctgatgcagtgcct
aggtcctcggcagaggtgcagctggcctgtgagacgacacaggccccaccaccagagacg
gagcaaatcaaagcaaaccattctaatctggcctctaaacccacctctaagcaacccaaa
ggcattatgggaatgtttgcaaacaagaatgtctccaagaatcaagattcaagcaaagag
attaaattggagcagaaagaggttacacctgtggttgagacctccaaaactaaacctgct
ccgaaaacaaatcctgtgactaacttctttgcgaaacaagcagccaaaaaacctgacaaa
tccatcaaggaagaggtagaaatagcccagacatcctcctcagtggatgagaagcccaca
agtccacctcctaaagcagacactcctgtcaaggaggaattagcaaaggatgctgtggtt
gagaaagatacaagtaagaccaagcgtcttgaacattctgatagtgaagaggagaagaac
gagagtcggaggaagaagagacggaggataaagaagcccgagccagacagtagtgacgat
gaggttattccagactctcctccacagttgcaagaaaagagggacccatcaccaagtcct
gagattcaagtaaagaaagaaccagttgctgtttcacattcagatgagctttcagattgt
aaacgaaggaagaggagacgtgtcctgaaatcgcgcacatttgtggatgacgaaggatgc
attgtgaccgagaaagactatgagagtgaatcctactccgagactgaggatgactttaag
ttcagtcaaccaactccgaagaatccaaacccaccaaagccatcaactggcaaaaaagag
gaggagaagaaaagtaagaaagctgctgcagcctctaataaatctactaagcaggcttct
attatgggattcttccagaagaaatga
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