Oncorhynchus tshawytscha (Chinook salmon): 112228876
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Entry
112228876 CDS
T05605
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112228876
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
112228876
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112228876
Prokaryotic type
112228876
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
112228876
NCBI-ProteinID:
XP_024250406
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Position
LG01:16718006..16729515
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AA seq
650 aa
AA seq
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MADAEPMLVPAPGREKRACPALEDEVAHSTKRPRVQKDENNRGGHSHKPAQDEAEEPEGE
ETEPLEEEDGEGAGLGSGEAFAEMMKHGLTELDVGILKCVSEHKGFSGILKERYSDFVVH
EVNKEGKTVQLDDLSVPEEAEEASVAEQPGSEVFTEEQKHQLEQLQLFKKKEGNVSIEMA
DDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAEVNIAAAPRKHSWP
KSRGAFCHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAE
RLSHLNKCLNNFKLGNFCYKKHPLKLGELRGNHFTVVIRNITGTDDQVQQAMTSLRETGF
INYYGMQRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYLVKCREEWAQSQDP
EAALKKLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRR
IEAFGLKAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYREKL
SADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPP
PVFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTIWLN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctggtccctgcccctgggcgggagaaaagggcctgccct
gccttggaggatgaggtggcccacagcaccaagagacccagagtccagaaggatgagaac
aacagaggaggacactctcacaagccagcccaggatgaggcagaagaaccagagggggag
gagacagagccactggaagaggaggatggagaaggggccgggttaggttctggagaggct
tttgcagagatgatgaagcatgggctcacagagctggatgtggggattctgaaatgtgtc
agtgaacacaagggcttctctgggatcctcaaggagaggtactctgactttgtcgtacat
gaggtcaacaaagaaggcaagacagtgcagttggatgatctctcggtccctgaggaggct
gaggaagccagtgtggcagagcagccagggtctgaggttttcacagaggagcagaaacac
caacttgagcagctgcagctcttcaagaaaaaagagggcaacgtgtccatagagatggcg
gatgacaccaaagagaaacggaccctggtccacaaagctgtcaagaccctgtaccctgga
ctggagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagcc
gggcagaaagcactcgcagaggtcaacatcgctgcagcccccaggaaacactcctggcct
aagagccgtggggccttctgccactttgtcctttacaaagagaacaaggacaccatggag
gccatcaacgtgctgtccaagttcctcaggatgaggcctaatgtgttctcttacatgggg
accaaggacaagagagccatcactgtgcaggagattgcagttctcaaggtcacagcagaa
agactgtctcaccttaacaagtgcctcaataacttcaagctgggaaacttctgctacaag
aaacaccctctgaaactgggggaactacggggaaatcatttcactgtggtcatcaggaac
atcaccgggacagatgaccaggtccagcaggccatgacctccctcagagagacaggcttt
atcaactactacggcatgcagcgctttggcaccactgccgtgcccacacaccaggttggc
aaagccatcctgcaagacaactggaatgaagtgatagatctgatcctgaagcctcgccct
ggagcggagaaaggttacctagtgaagtgtcgtgaggagtgggcccagtcccaggaccca
gaggcagcgcttaagaagctacctgtgaaacgctgtgtggagggacagctgctccgaggc
ctctccatgtacggcaagaagaacatcatcactgcatttgccatgatccctcgtaacaac
cgactgatgtacatccacagctaccagagctttatgtggaacaccatggtcagcagacgc
attgaggccttcgggctgaaggctgtggagggagacctcgtgctcagaggaggcactgcg
ttcgtgctgtctgcagccgaggcagagacccactctattcaggacgtggtgatgccccta
ccagggtttgatgtcatctaccccactcaccacgtggggaagggctacagggagaagctg
agtgcagataacctggacattgacaacatgagacacagggtgagggactactctctggcc
ggggcctaccgacgcatcctcatcaaacccagtgacgtcagctgggaggtgattaactat
gatgaccctcgtatctctctggttcacactgatgtggagaaactagaggaccaacctcct
ccggtcttcaacaaagaggggaagtacagggctttgaggatggagttctctctgcctccc
tccacctatgccaccatggccatcagagaggtgctcaagatggacaccagcatcaagaac
cagacccagctcaacaccatctggctcaactaa
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