Oncorhynchus tshawytscha (Chinook salmon): 112228939
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Entry
112228939 CDS
T05605
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228939
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112228939
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Gene cluster
GFIT
Motif
Pfam:
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
112228939
NCBI-ProteinID:
XP_024250514
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Position
LG30:complement(5095273..5102736)
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AA seq
815 aa
AA seq
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MQEDPVYDFPEPVGELVGERRACPQRGSLKNISVLDRLLLTHPVWLQLSINSATALHILQ
REPPGTFLVRKSNTSQKKVLCVRLADDSVPSFVKQFVLREVDSTFSLEKAAIGFPDLFRL
IAFYCVSRDVLPFPLELPEAIVKASSHKQLESISHMGVEFWSSQLNFRGPRNGPPPVEAA
PLPPSPTPEDCATPQESPTLFQEFCPIQTRSPRELNCGAAGQGALCFINPLFLQSHPALH
KRHQFKRSLKVRVSTENSSPLSPPVAPPPPPPLLAKKNIKSKKVQRASGAVEARVEGEGG
TAPFQEDSDYLQPCLVLPVLPQKTRVTPTLSPTAEEDYHVPLGLLQGLAHEKGGEEEVGL
LLEQRYAPSLSELDSSSSLSSLEEAEESSERIPLTRGTSNPSPPCTLPPRQPVSVLRKLS
AVFVSFFVPEKRVARLVEDLSRDRRIAFGVLVQDFLRQQREAIKPQCQRSSVELLQGIRF
FLSQAKTFLLDCGDLEPPIETMVPDDEKDLVLEKAMFRCVLKPLKGQIDRTLQTLHERDG
STQSMAESLAVARGKTPLECFGVRVGVPDAAGVEKVRQKLALMRRAYSPIDKVVLLLQVC
KLIYKAMTDNSGKEFGADDFLPALSYVIVQCNMPELSVEVEYMMELLESSWLTGEGGYYL
TSVYASLCLIQSLPEEMPSSGLTQGARDSLKDWSRRRSSQALSQKKIQEQLRFVKVLFQD
GESSWIKTLQWRAGVSGEALTQLCAAKFGVDDPGLYKLYWRSEGEIQALPAQAQIQDLQG
QGSSGTPLIYQKAKHDGLKTCKLTREAAVDLVESP
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggacccggtgtatgatttccctgagccggtcggggagctggtaggagagagg
cgggcttgtcctcagcgtggctccctgaagaacatcagtgtgctggaccgtctgcttctc
acacaccccgtctggctgcagctgtccatcaactctgctaccgctctgcacatcctacaa
cgggagccgcctgggacctttctggtgcgcaagtcgaacacctcgcagaagaaagtgctg
tgtgtcaggcttgcagacgacagcgttccctcctttgtcaaacaatttgtcctccgcgaa
gtggactccaccttctctttggagaaagcggctatcggtttccctgacctcttccggctc
attgccttctactgtgttagccgggatgtgttgcccttcccactggagctccctgaggcc
atagtcaaggcttcatcccacaaacagctggagtccatttcacacatgggcgtggagttc
tggagttcccagctgaacttcagaggtccacgcaatgggcccccaccagtcgaggcggca
ccactgccccctagccccacccctgaggactgtgccacgccccaggagagccccaccctg
ttccaggagttctgccccatccaaacacgcagcccccgggagctgaactgtggggcagca
ggtcaaggggctctctgtttcatcaacccactcttcctgcaatcccatcctgcactgcac
aaacgccaccagttcaagcgcagcctcaaggtgcgtgtctcgactgagaactctagccct
ttgtccccaccagttgcccctccacctcccccacctctgctggccaagaaaaatattaag
agcaagaaggtccagcgggccagtggagcagtggaagccagagtggagggtgagggaggg
acagcacctttccaggaggactcagactatttgcagccatgcttggttcttccagttctt
ccgcagaagaccagggtcacacccacactgtctcccactgcagaggaggactaccatgtg
cccttaggtctcctgcagggactggcccatgaaaaaggaggtgaggaggaggtgggtctc
ctgctggagcagaggtatgctccctccctgagtgagctggacagcagcagttccctcagc
agcctggaggaggcagaggagagctcagagcgaattcccctcaccaggggtaccagtaac
ccctcacccccatgcaccttacccccacgccagcccgtctcagtcctgcgcaagctgagt
gcagtcttcgtgtccttcttcgtgccagagaagcgtgtggcgaggctggtggaggacctg
tcccgtgacaggaggattgcgtttggtgtcctggtgcaggatttcctcaggcagcagcgg
gaggcgatcaagcctcagtgccagagatctagcgtagagctactgcagggcattcgcttc
ttcctctcccaggccaagaccttcctgctggactgtggagacctagaacccccaattgag
accatggtgcctgatgatgaaaaagacctggtgctggagaaagccatgttccgctgtgtg
ctgaaacctctgaagggacagatagacaggacactgcaaactctgcatgagcgagacggt
tccacccagagcatggcagagagcctggctgtggccaggggaaagaccccgttggagtgt
tttggagtgcgggtgggagtgccggatgctgccggtgtggagaaggtgcggcagaagtta
gctctcatgaggcgggcttactcgcccattgacaaggttgtgctgctactgcaggtctgc
aagctcatctataaagccatgacggacaattcaggcaaggaattcggtgcggatgacttc
ctaccagccctgtcctatgtcattgtacagtgtaacatgccagagctgtctgtggaggtg
gagtacatgatggagctgctggagtcatcgtggctgacaggggagggtgggtactacctg
accagtgtgtatgccagcctgtgcctgatccagagcctgcctgaagaaatgccctctagc
gggctgacccagggggccagagactccctgaaagactggagtcggcgccggagcagccag
gctctgagccagaaaaaaatacaagagcaactgaggtttgtcaaggttctgtttcaagat
ggagaaagcagctggataaaaaccctgcagtggagggcaggagttagtggggaggccctg
acccagctctgtgctgctaagtttggtgtggatgacccaggactgtacaagctgtactgg
cggagtgagggggagattcaagccctcccagcccaggcccagatccaggacctacagggc
caaggcagcagtggaacacccctcatataccagaaagccaaacatgatggactcaagact
tgcaaactaacaagagaggcggctgtggaccttgtggaatcaccttga
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